Factsheet for Bra012702.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09672	Canola	golgi	66.14	94.89
CDX90506	Canola	plasma membrane	99.6	90.96
AT4G16590.1	Thale cress	endoplasmic reticulum, plasma membrane	84.36	81.92
Bra008638.1-P	Field mustard	plasma membrane	66.53	66.53
Bra006343.1-P	Field mustard	plasma membrane	66.14	66.27
Bra012416.1-P	Field mustard	plasma membrane	67.52	62.45
Bra024603.1-P	Field mustard	plasma membrane	61.58	56.04
Bra005779.1-P	Field mustard	plasma membrane	57.43	54.51
Bra009512.1-P	Field mustard	plasma membrane	57.03	54.14
Bra007207.1-P	Field mustard	plasma membrane	54.85	52.96
Bra020212.1-P	Field mustard	plasma membrane	54.65	51.69
Bra006633.1-P	Field mustard	plasma membrane	51.68	51.18
Bra023020.1-P	Field mustard	plasma membrane	53.66	49.45
Bra032705.1-P	Field mustard	plasma membrane	63.76	45.22
Bra017305.1-P	Field mustard	plasma membrane	53.86	42.37
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	39.41	30.15
Bra000635.1-P	Field mustard	plasma membrane	40.99	29.91
Bra039061.1-P	Field mustard	plasma membrane	40.0	29.88
Bra025323.1-P	Field mustard	plasma membrane	39.41	29.48
Bra001246.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.0	28.9
Bra023993.1-P	Field mustard	plasma membrane	38.02	28.87
Bra002426.1-P	Field mustard	plasma membrane	54.46	28.38
Bra011284.1-P	Field mustard	plasma membrane	39.8	20.7
Bra033039.1-P	Field mustard	plasma membrane	9.31	14.42

Protein Annotations

EnsemblPlants:Bra012702.1	EnsemblPlants:Bra012702.1-P	EnsemblPlantsGene:Bra012702	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21	PFAM:PF13641
SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002540921	UniProt:M4D892	MapMan:21.2.3.1.1.1

Description

AT4G13410 (E=8e-205) ATCSLA15, CSLA15 | ATCSLA15; cellulose synthase/ transferase, transferring glycosyl groups

Coordinates

chrA03:+:22651881..22656389

Molecular Weight (calculated)

59040.1 Da

IEP (calculated)

9.229

GRAVY (calculated)

0.053

Length

505 amino acids

Sequence
(BLAST)

001: MSLYLKPFLF LYDSTLSLLL LLFNGWSLED PAAAHERLEA DNNAAESEWM QIQYLWRKTR SLVLLPVFKG LVIMCLVLSI IVFFESFYMN IVIFFGKLLR
101: RKPEKLYKWE AMQEDVEAGS ENYPKVLVQI PMYNEKEVFQ ISIAAVCSLL WPSSRLVIQV VDDSTDPVVR EGVDIEIAKW QSQGINIRCE RRDNRNGYKA
201: GAMKEALTHN YVKQCDFVAV FDADFQPDPD YLARTIPFLV HNPDVALVQA RWIFVNANKC LMTRMQEMSL NYHFKVEQES GFTRHAFFGF NGTAGVWRIS
301: AMDAAGGWKS RTTVEDMDLA VRVGLHGWKF VYLNDLTVRN ELPSKFKAYR FQQHRWSCGP ANLFRKMTME IIYNKRVSIW KKFYVIYSFF FVRKVAVHFL
401: TFFFYCIIVP TSVFFPEIHI PLWSTIYVPS MISIFHTMAT PRSFYLVIIW ILFENVMAMH RTKGTWIGLL EGGRVNEWVV TEKLGDALKN KLLSKVVQKK
501: SYYER

Best Arabidopsis Sequence Match ( AT4G16590.1 )
(BLAST)

001: MSLFLKPFLF LYDTTLSLLL LLFNGWSLED TAAAQKRREA DKNAAETEWI QLQYLWTKTR SVVLLPVFKG LVVMCLVLSI IVFFESFYMN FVILFVKLFK
101: RKPHKVYKWE AMQEDVEVGP DNYPMVLIQI PMYNEKEEGV DVEIAKWQSQ GINIRCERRD NRNGYKAGAM KEALTQSYVK QCDFVAVFDA DFQPEPDYLI
201: RAVPFLVHNP DVALVQARWI FVNANKCLMT RMQEMSLNYH FKVEQESGST RHAFFGFNGT AGVWRISAME AAGGWKSRTT VEDMDLAVRV GLHGWKFVYL
301: NDLTVRNELP SKFKAYRFQQ HRWSCGPANL FRKMTMEIIF NKRVSIWKKF YVIYSFFFVR KVAVHFLTFF FYCIIVPTSV FFPEIHIPSW STIYVPSLIS
401: IFHTLATPRS FYLVIFWVLF ENVMAMHRTK GTCIGLLEGG RVNEWVVTEK LGDALKSKLL SRVVQRKSCY QRVNSKEVMV GVYILGCALY GLIYGHTWLH
501: FYLFLQATAF FVSGFGFVGT

Arabidopsis Description

ATCSLA01cellulose synthase-like A01 [Source:TAIR;Acc:AT4G16590]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.