Factsheet for Bra024603.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
endoplasmic reticulum 4
extracellular 3
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44151	Canola	plasma membrane	99.64	99.64
CDY04707	Canola	plasma membrane	98.92	98.92
AT1G23480.2	Thale cress	plasma membrane	93.33	93.17
Bra007207.1-P	Field mustard	plasma membrane	63.78	67.69
Bra008638.1-P	Field mustard	plasma membrane	61.44	67.52
Bra006343.1-P	Field mustard	plasma membrane	61.26	67.46
Bra005779.1-P	Field mustard	plasma membrane	62.88	65.6
Bra009512.1-P	Field mustard	plasma membrane	62.7	65.41
Bra012416.1-P	Field mustard	plasma membrane	61.26	62.27
Bra012702.1-P	Field mustard	plasma membrane	56.04	61.58
Bra020212.1-P	Field mustard	plasma membrane	57.84	60.11
Bra006633.1-P	Field mustard	plasma membrane	54.77	59.61
Bra023020.1-P	Field mustard	plasma membrane	57.66	58.39
Bra017305.1-P	Field mustard	plasma membrane	56.94	49.22
Bra032705.1-P	Field mustard	plasma membrane	60.54	47.19
Bra039061.1-P	Field mustard	plasma membrane	40.9	33.58
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	39.82	33.48
Bra025323.1-P	Field mustard	plasma membrane	40.36	33.19
Bra002426.1-P	Field mustard	plasma membrane	57.48	32.92
Bra000635.1-P	Field mustard	plasma membrane	40.72	32.66
Bra001246.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.18	31.9
Bra023993.1-P	Field mustard	plasma membrane	38.2	31.88
Bra011284.1-P	Field mustard	plasma membrane	40.0	22.86
Bra033039.1-P	Field mustard	plasma membrane	10.99	18.71

Protein Annotations

EnsemblPlants:Bra024603.1	EnsemblPlants:Bra024603.1-P	EnsemblPlantsGene:Bra024603	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21	PFAM:PF13641
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002542984	UniProt:M4E748	MapMan:21.2.3.1.1.1	:

Description

AT1G23480 (E=2e-312) ATCSLA03, CSLA03, ATCSLA3 | ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3); cellulose synthase/ transferase, transferring glycosyl groups

Coordinates

chrA09:-:24101243..24103565

Molecular Weight (calculated)

64280.0 Da

IEP (calculated)

8.648

GRAVY (calculated)

0.205

Length

555 amino acids

Sequence
(BLAST)

001: MSPFMKFFNF LYDSLPPSSW FLVQRHNLAS SSETDEVVRS GIIGELIYIW KETRIFVFIP ILKFLVTMCL VMSFLLFIER VYMSVVVVIV KLLRRTPEKV
101: HKWEAINDDD LELAHTNYPM VLIQIPMYNE KEVCQLSIGA ACRLSWPLDR MIVQVLDDST DPASKELVNA ECDKWARKGI NIMSEIRDNR IGYKAGALKA
201: GMMHNYVKQC EFVAIFDADF QPDPDFLART IPFLIHNREI SLVQCRWKFV NANECLMTRM QEMSLNYHFL AEQESGSSIH AFFGFNGTAG VWRIAALNEA
301: GGWKDRTTVE DMDLAVRACL HGWKFVYVHN VEVKNELPST FKAYRFQQHR WSCGPANLWR KMTMEILQNK KVSAWKKLYL IYNFFFIRKI VVHIFTFVFY
401: CLILPATVLF PELQVPKWAT VYVPSTITLL NALATPRSLH LLVFWILFEN VMSMHRTKAT FIGLLEAGRV NEWVVTEKLG DTLKSKLITK ATTKLYTRFG
501: QRINWRELVV GLYIFICGCY DFAYGGSYFY VYLFLQACAF FVAGVGYIGT IVPIG

Best Arabidopsis Sequence Match ( AT1G23480.1 )
(BLAST)

001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV

Arabidopsis Description

CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.