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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY40295 Canola plasma membrane 96.34 96.34
CDY68733 Canola plasma membrane 46.7 93.75
AT1G24070.1 Thale cress plasma membrane 86.26 85.33
Bra006343.1-P Field mustard plasma membrane 73.81 79.96
Bra008638.1-P Field mustard plasma membrane 73.08 79.01
Bra012702.1-P Field mustard plasma membrane 62.45 67.52
Bra024603.1-P Field mustard plasma membrane 62.27 61.26
Bra005779.1-P Field mustard plasma membrane 59.34 60.9
Bra009512.1-P Field mustard plasma membrane 59.34 60.9
Bra007207.1-P Field mustard plasma membrane 56.78 59.27
Bra023020.1-P Field mustard plasma membrane 57.33 57.12
Bra032705.1-P Field mustard plasma membrane 72.71 55.76
Bra020212.1-P Field mustard plasma membrane 54.4 55.62
Bra006633.1-P Field mustard plasma membrane 51.47 55.1
Bra017305.1-P Field mustard plasma membrane 57.88 49.22
Bra007838.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 39.19 32.42
Bra039061.1-P Field mustard plasma membrane 39.56 31.95
Bra025323.1-P Field mustard plasma membrane 39.19 31.7
Bra023993.1-P Field mustard plasma membrane 38.46 31.58
Bra002426.1-P Field mustard plasma membrane 54.4 30.65
Bra000635.1-P Field mustard plasma membrane 38.83 30.64
Bra001246.1-P Field mustard cytosol, peroxisome, plasma membrane 38.1 29.76
Bra011284.1-P Field mustard plasma membrane 40.84 22.97
Bra033039.1-P Field mustard plasma membrane 11.17 18.71
Protein Annotations
EnsemblPlants:Bra012416.1EnsemblPlants:Bra012416.1-PEnsemblPlantsGene:Bra012416Gene3D:3.90.550.10GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF21PFAM:PF13641
SEG:segSUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0002540B99UniProt:M4D7F6MapMan:21.2.3.1.1.1
Description
AT1G24070 (E=7e-274) ATCSLA10, CSLA10 | ATCSLA10; cellulose synthase/ transferase, transferring glycosyl groups
Coordinates
chrA07:+:7813971..7817547
Molecular Weight (calculated)
63235.2 Da
IEP (calculated)
9.133
GRAVY (calculated)
0.194
Length
546 amino acids
Sequence
(BLAST)
001: MALFLKPLII FLHDSWLALL SLLNYGWSSE EAAGIPKRLQ ASIKTTWGRQ LRSSLMVPLF KCLVAFCLII SLLVFIEGVY MNLVVLYVKL FKRKPEKVYK
101: WEPMQEDIEL GDESYPMVLV QIPMYNEKEV LKLSIGAACR LTWPLDRLIV QVLDDSTDET IKELVNTECA KWENKGVNIK CERRDNRNGY KAGALKQGMK
201: HNYVKLCNYV AIFDADFQPE PDYLQRSVPF LVHNPNVALV QARWRFINAN KCLMTRIQEM SLNYHFMAEQ ESGSTRHAFF SFNGTAGVWR MAAMEEAGGW
301: NDRTTVEDMD LAIRAGILGW KFVFLDDLTV KSELPSKFKA FRFQQHRWSC GPANLFRKMI MEIIRNKRVT LWKKLYLIYS FFFLRKIVVH FFTFFFYCVI
401: LPTSVFFPEI NIPAWSTFYI PSLITLFIVI ATPRSFYLVI FWVLFENVMS MHRTKGTFIG ILEGGRVNEW VVTEKLGDAL KTKLLPQIVK PRNGCFQSMN
501: SKEIMMGTYM LCCACYGVLF GDTMLYLYLF MQAVAFLVSG VGFVGT
Best Arabidopsis Sequence Match ( AT1G24070.1 )
(BLAST)
001: MTTFLKSLIF LQDSCLAFLS LMFHRGSSED AAEALKKLET SINGARISFD TTWTREFRSL FIVPLFKCLV AFCLIISLLV FIEGIYMNLV VLYVKVFERK
101: PEKVYRWEAM QEDIELGHET YPMVLVQIPM YNEKEVLQLS IGAACRLIWP LDRLIVQVLD DSTDQTIKEL VNTECAKWES KGVNIKCERR DNRNGYKAGA
201: LKEGMKHNYV KLCNYVVIFD ADFQPEPDYL QHSVPFLVHN PEVALVQARW RFMNANKCLM TRMQEMSLNY HFMAEQESGS TRHAFFSFNG TAGVWRMAAM
301: EEAGGWHDRT TVEDMDLAVR AGLLGWKFVF LNDLTVKSEL PSKFKAFRFQ QHRWSCGPAN LFRKMIMEII RNKRVTIWKK LYLVYSFFFL RKIIVHCFTF
401: IFYCVILPTS VFFPEVNIPA WSTFYIPSMI TLCIVIATPR SFYLVIFWIL FENVMSMHRT KGTFIGILER QRVNEWVVTE KLGDALKTKL LPRIGKPSNM
501: FLERVNSKEI MVGIYILCCA CYGLFFGNTL LYLYLFMQAV AFLISGVGFV GT
Arabidopsis Description
CSLA10Probable mannan synthase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR87]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.