Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 4
- extracellular 5
- vacuole 3
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68733 | Canola | plasma membrane | 44.93 | 91.18 |
| CDY40295 | Canola | plasma membrane | 86.96 | 87.91 |
| Bra012416.1-P | Field mustard | plasma membrane | 85.33 | 86.26 |
| AT4G13410.1 | Thale cress | extracellular, plasma membrane | 75.36 | 77.47 |
| AT5G16190.4 | Thale cress | plasma membrane | 73.19 | 75.23 |
| AT4G16590.1 | Thale cress | endoplasmic reticulum, plasma membrane | 64.86 | 68.85 |
| AT1G23480.2 | Thale cress | plasma membrane | 61.78 | 61.33 |
| AT5G03760.1 | Thale cress | plasma membrane | 57.07 | 59.1 |
| AT3G56000.1 | Thale cress | endoplasmic reticulum | 55.25 | 57.01 |
| AT5G22740.1 | Thale cress | plasma membrane | 54.35 | 56.18 |
| AT2G35650.1 | Thale cress | plasma membrane | 56.34 | 55.94 |
| AT3G28180.1 | Thale cress | plasma membrane | 39.86 | 32.69 |
| AT4G31590.1 | Thale cress | plasma membrane | 40.58 | 32.37 |
| AT2G24630.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 39.67 | 31.74 |
| AT3G07330.1 | Thale cress | cytosol, peroxisome, plasma membrane | 38.95 | 31.52 |
| AT4G07960.1 | Thale cress | plasma membrane | 39.31 | 31.04 |
Protein Annotations
| MapMan:21.2.3.1.1.1 | Gene3D:3.90.550.10 | EntrezGene:839019 | UniProt:A0A068FJK1 | ProteinID:AAF87149.1 | ProteinID:AEE30475.1 |
| EMBL:AK118701 | ArrayExpress:AT1G24070 | EnsemblPlantsGene:AT1G24070 | RefSeq:AT1G24070 | TAIR:AT1G24070 | RefSeq:AT1G24070-TAIR-G |
| EnsemblPlants:AT1G24070.1 | TAIR:AT1G24070.1 | Symbol:ATCSLA10 | GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016740 |
| GO:GO:0016757 | GO:GO:0047259 | GO:GO:0071555 | GO:GO:0097502 | InterPro:IPR029044 | EMBL:KJ676988 |
| RefSeq:NP_173818.1 | InterPro:Nucleotide-diphossugar_trans | PFAM:PF13641 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF21 | UniProt:Q9LR87 |
| SUPFAM:SSF53448 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00000482B9 | : | : |
Description
CSLA10Probable mannan synthase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR87]
Coordinates
chr1:-:8516166..8519984
Molecular Weight (calculated)
64158.2 Da
IEP (calculated)
8.640
GRAVY (calculated)
0.205
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTFLKSLIF LQDSCLAFLS LMFHRGSSED AAEALKKLET SINGARISFD TTWTREFRSL FIVPLFKCLV AFCLIISLLV FIEGIYMNLV VLYVKVFERK
101: PEKVYRWEAM QEDIELGHET YPMVLVQIPM YNEKEVLQLS IGAACRLIWP LDRLIVQVLD DSTDQTIKEL VNTECAKWES KGVNIKCERR DNRNGYKAGA
201: LKEGMKHNYV KLCNYVVIFD ADFQPEPDYL QHSVPFLVHN PEVALVQARW RFMNANKCLM TRMQEMSLNY HFMAEQESGS TRHAFFSFNG TAGVWRMAAM
301: EEAGGWHDRT TVEDMDLAVR AGLLGWKFVF LNDLTVKSEL PSKFKAFRFQ QHRWSCGPAN LFRKMIMEII RNKRVTIWKK LYLVYSFFFL RKIIVHCFTF
401: IFYCVILPTS VFFPEVNIPA WSTFYIPSMI TLCIVIATPR SFYLVIFWIL FENVMSMHRT KGTFIGILER QRVNEWVVTE KLGDALKTKL LPRIGKPSNM
501: FLERVNSKEI MVGIYILCCA CYGLFFGNTL LYLYLFMQAV AFLISGVGFV GT
101: PEKVYRWEAM QEDIELGHET YPMVLVQIPM YNEKEVLQLS IGAACRLIWP LDRLIVQVLD DSTDQTIKEL VNTECAKWES KGVNIKCERR DNRNGYKAGA
201: LKEGMKHNYV KLCNYVVIFD ADFQPEPDYL QHSVPFLVHN PEVALVQARW RFMNANKCLM TRMQEMSLNY HFMAEQESGS TRHAFFSFNG TAGVWRMAAM
301: EEAGGWHDRT TVEDMDLAVR AGLLGWKFVF LNDLTVKSEL PSKFKAFRFQ QHRWSCGPAN LFRKMIMEII RNKRVTIWKK LYLVYSFFFL RKIIVHCFTF
401: IFYCVILPTS VFFPEVNIPA WSTFYIPSMI TLCIVIATPR SFYLVIFWIL FENVMSMHRT KGTFIGILER QRVNEWVVTE KLGDALKTKL LPRIGKPSNM
501: FLERVNSKEI MVGIYILCCA CYGLFFGNTL LYLYLFMQAV AFLISGVGFV GT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.