Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005779.1-P | Field mustard | plasma membrane | 94.37 | 94.55 |
| CDY10358 | Canola | plasma membrane | 94.18 | 94.36 |
| CDY11268 | Canola | plasma membrane | 94.0 | 94.17 |
| CDX70286 | Canola | plasma membrane | 94.0 | 94.17 |
| Bra009512.1-P | Field mustard | plasma membrane | 93.81 | 93.98 |
| Solyc09g009010.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 46.34 | 82.61 |
| CDX80885 | Canola | plasma membrane | 80.49 | 81.71 |
| KRH67832 | Soybean | plasma membrane | 80.49 | 80.49 |
| KRG96119 | Soybean | plasma membrane | 80.3 | 80.3 |
| Solyc10g083670.1.1 | Tomato | plasma membrane | 80.11 | 80.11 |
| PGSC0003DMT400072644 | Potato | plasma membrane | 79.55 | 79.55 |
| VIT_08s0007g03990.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 80.49 | 79.44 |
| GSMUA_Achr10P... | Banana | plasma membrane | 77.86 | 78.9 |
| GSMUA_Achr2P20260_001 | Banana | plasma membrane | 78.61 | 78.61 |
| GSMUA_Achr10P... | Banana | plasma membrane | 78.05 | 78.05 |
| PGSC0003DMT400007050 | Potato | mitochondrion | 77.67 | 77.67 |
| GSMUA_Achr6P13400_001 | Banana | plasma membrane | 78.61 | 77.31 |
| KRH32645 | Soybean | plasma membrane | 74.11 | 77.3 |
| KRH20021 | Soybean | plasma membrane | 73.92 | 77.1 |
| AT5G22740.1 | Thale cress | plasma membrane | 70.92 | 70.79 |
| GSMUA_Achr5P15920_001 | Banana | plasma membrane | 73.17 | 65.0 |
| AT1G23480.2 | Thale cress | plasma membrane | 64.35 | 61.69 |
| AT2G35650.1 | Thale cress | plasma membrane | 63.79 | 61.15 |
| AT5G16190.4 | Thale cress | plasma membrane | 60.41 | 59.96 |
| AT4G13410.1 | Thale cress | extracellular, plasma membrane | 59.47 | 59.03 |
| AT3G56000.1 | Thale cress | endoplasmic reticulum | 58.72 | 58.5 |
| AT1G24070.1 | Thale cress | plasma membrane | 59.1 | 57.07 |
| AT4G16590.1 | Thale cress | endoplasmic reticulum, plasma membrane | 53.1 | 54.42 |
| AT3G28180.1 | Thale cress | plasma membrane | 43.9 | 34.77 |
| AT4G31590.1 | Thale cress | plasma membrane | 44.84 | 34.54 |
| AT2G24630.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 44.47 | 34.35 |
| AT3G07330.1 | Thale cress | cytosol, peroxisome, plasma membrane | 42.96 | 33.58 |
| AT4G07960.1 | Thale cress | plasma membrane | 42.4 | 32.33 |
Protein Annotations
| MapMan:21.2.3.1.1.1 | Gene3D:3.90.550.10 | EntrezGene:831734 | UniProt:A0A178UH35 | ProteinID:AED90651.1 | EMBL:AK226605 |
| ArrayExpress:AT5G03760 | EnsemblPlantsGene:AT5G03760 | RefSeq:AT5G03760 | TAIR:AT5G03760 | RefSeq:AT5G03760-TAIR-G | EnsemblPlants:AT5G03760.1 |
| TAIR:AT5G03760.1 | Symbol:ATCSLA09 | EMBL:AY060563 | EMBL:AY149935 | Unigene:At.27372 | ProteinID:BAB08601.1 |
| ProteinID:CAB82941.1 | GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009294 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009617 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0047259 | GO:GO:0051753 | GO:GO:0071555 |
| GO:GO:0097502 | InterPro:IPR029044 | EMBL:KJ138709 | RefSeq:NP_195996.1 | InterPro:Nucleotide-diphossugar_trans | ProteinID:OAO92544.1 |
| PFAM:PF13641 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025181 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR32044 |
| PANTHER:PTHR32044:SF10 | UniProt:Q9LZR3 | SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI0000048ABE | UniProt:W8Q6G5 |
| SEG:seg | : | : | : | : | : |
Description
CSLA9RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35]
Coordinates
chr5:-:985622..990630
Molecular Weight (calculated)
60922.8 Da
IEP (calculated)
9.200
GRAVY (calculated)
0.128
Length
533 amino acids
Sequence
(BLAST)
(BLAST)
001: MELGDTTSVI PDSFMGYRDD ITMQMSMVLD QIRAPLIVPA LRLGVYICLT MSVMLFVERV YMGIVISLVK LFGRKPDKRF KYEPIKDDIE LGNSAYPMVL
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.