Factsheet for Bra009512.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra023252.1-P
Bra035511.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03760.1	Bra023252.1-P	AT1G32230.1	19548978
AT5G03760.1	Bra035511.1-P	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70286	Canola	plasma membrane	99.44	99.44
Bra005779.1-P	Field mustard	plasma membrane	96.43	96.43
AT5G03760.1	Thale cress	plasma membrane	93.98	93.81
Solyc09g009010.2.1	Tomato	cytosol, peroxisome, plasma membrane	46.99	83.61
KRH67832	Soybean	plasma membrane	82.33	82.18
KRG96119	Soybean	plasma membrane	82.33	82.18
Solyc10g083670.1.1	Tomato	plasma membrane	81.58	81.43
PGSC0003DMT400072644	Potato	plasma membrane	81.02	80.86
GSMUA_Achr10P...	Banana	plasma membrane	79.51	80.42
VIT_08s0007g03990.t01	Wine grape	cytosol, peroxisome, plasma membrane	81.58	80.37
PGSC0003DMT400007050	Potato	mitochondrion	79.14	78.99
GSMUA_Achr2P20260_001	Banana	plasma membrane	79.14	78.99
KRH32645	Soybean	plasma membrane	75.56	78.67
KRH20021	Soybean	plasma membrane	75.56	78.67
GSMUA_Achr10P...	Banana	plasma membrane	78.76	78.61
GSMUA_Achr6P13400_001	Banana	plasma membrane	80.08	78.6
Bra006633.1-P	Field mustard	plasma membrane	69.17	72.16
Bra020212.1-P	Field mustard	plasma membrane	71.62	71.35
GSMUA_Achr5P15920_001	Banana	plasma membrane	74.81	66.33
Bra008638.1-P	Field mustard	plasma membrane	61.84	65.15
Bra006343.1-P	Field mustard	plasma membrane	61.65	65.08
Bra024603.1-P	Field mustard	plasma membrane	65.41	62.7
Bra023020.1-P	Field mustard	plasma membrane	63.72	61.86
Bra007207.1-P	Field mustard	plasma membrane	59.77	60.8
Bra012416.1-P	Field mustard	plasma membrane	60.9	59.34
Bra012702.1-P	Field mustard	plasma membrane	54.14	57.03
Bra017305.1-P	Field mustard	plasma membrane	63.35	52.49
Bra032705.1-P	Field mustard	plasma membrane	59.59	44.52
Bra002426.1-P	Field mustard	plasma membrane	71.05	39.01
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	44.36	35.76
Bra023993.1-P	Field mustard	plasma membrane	42.29	33.83
Bra039061.1-P	Field mustard	plasma membrane	42.67	33.58
Bra025323.1-P	Field mustard	plasma membrane	42.11	33.19
Bra000635.1-P	Field mustard	plasma membrane	42.29	32.51
Bra001246.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.11	32.05
Bra011284.1-P	Field mustard	plasma membrane	44.55	24.41
Bra033039.1-P	Field mustard	plasma membrane	10.9	17.79

Protein Annotations

EnsemblPlants:Bra009512.1	EnsemblPlants:Bra009512.1-P	EnsemblPlantsGene:Bra009512	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF10	PFAM:PF13641
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002547B47	UniProt:M4CZ65	MapMan:21.2.3.1.1.1	:

Description

AT5G03760 (E=2e-301) ATCSLA09, CSLA09, ATCSLA9, CSLA9, RAT4 | ATCSLA09; mannan synthase/ transferase, transferring glycosyl groups

Coordinates

chrA10:+:17002727..17006990

Molecular Weight (calculated)

60828.8 Da

IEP (calculated)

9.108

GRAVY (calculated)

0.135

Length

532 amino acids

Sequence
(BLAST)

001: MELGDSSAVI PDSFMGYRDD ITMQISMILD QIRAPLIVPV LRLAVYICLT MSVMLFVERV YMGIVISLVK LFGRKPEKRF KWEPMKDDIE LGNSVYPMVL
101: VQIPMYNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EPDYLWKTVP FLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKIVA HIVTFIFYCV VLPATVLVPE VIVPKWGAVY
401: IPSIITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDL KAKSATKAPK KLRFRFGDRI HVLELGVGMY LFSIGCYDAL
501: FGKNHYYLYL FAQAIAFFIA GCGQIGTVVP NY

Best Arabidopsis Sequence Match ( AT5G03760.1 )
(BLAST)

001: MELGDTTSVI PDSFMGYRDD ITMQMSMVLD QIRAPLIVPA LRLGVYICLT MSVMLFVERV YMGIVISLVK LFGRKPDKRF KYEPIKDDIE LGNSAYPMVL
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH

Arabidopsis Description

CSLA9RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.