Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc08g005270.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03760.1 | Solyc08g005270.2.1 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400072644 | Potato | plasma membrane | 98.5 | 98.5 |
| Solyc09g009010.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 49.72 | 88.63 |
| KRH67832 | Soybean | plasma membrane | 84.43 | 84.43 |
| KRG96119 | Soybean | plasma membrane | 84.24 | 84.24 |
| VIT_08s0007g03990.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 84.43 | 83.33 |
| GSMUA_Achr10P... | Banana | plasma membrane | 81.8 | 82.89 |
| CDY11268 | Canola | plasma membrane | 82.18 | 82.33 |
| Bra005779.1-P | Field mustard | plasma membrane | 81.99 | 82.14 |
| CDY10358 | Canola | plasma membrane | 81.8 | 81.95 |
| CDX70286 | Canola | plasma membrane | 81.61 | 81.77 |
| Bra009512.1-P | Field mustard | plasma membrane | 81.43 | 81.58 |
| GSMUA_Achr2P20260_001 | Banana | plasma membrane | 80.11 | 80.11 |
| AT5G03760.1 | Thale cress | plasma membrane | 80.11 | 80.11 |
| GSMUA_Achr6P13400_001 | Banana | plasma membrane | 81.24 | 79.89 |
| GSMUA_Achr10P... | Banana | plasma membrane | 79.74 | 79.74 |
| KRH20021 | Soybean | plasma membrane | 74.86 | 78.08 |
| KRH32645 | Soybean | plasma membrane | 74.86 | 78.08 |
| Solyc06g074630.2.1 | Tomato | plasma membrane | 72.23 | 72.23 |
| Solyc05g055410.1.1 | Tomato | plasma membrane | 70.92 | 71.86 |
| Solyc11g066820.1.1 | Tomato | plasma membrane | 69.79 | 70.99 |
| CDX80885 | Canola | plasma membrane | 69.23 | 70.29 |
| Solyc11g007600.1.1 | Tomato | plasma membrane | 68.48 | 69.0 |
| GSMUA_Achr5P15920_001 | Banana | plasma membrane | 75.8 | 67.33 |
| Solyc02g089640.2.1 | Tomato | plasma membrane | 42.59 | 34.71 |
| Solyc08g006310.2.1 | Tomato | golgi, peroxisome, plasma membrane | 43.71 | 33.57 |
| Solyc09g057640.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 42.03 | 32.65 |
| Solyc12g088240.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 41.84 | 32.41 |
| Solyc04g077470.2.1 | Tomato | plasma membrane | 43.53 | 31.27 |
Protein Annotations
| EnsemblPlants:Solyc10g083670.1.1 | EnsemblPlantsGene:Solyc10g083670.1 | Gene3D:3.90.550.10 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0097502 | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 |
| PANTHER:PTHR32044:SF10 | PFAM:PF13641 | SEG:seg | SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI0002769F30 |
| UniProt:K4D3F4 | MapMan:21.2.3.1.1.1 | : | : | : | : |
Description
Glucomannan 4-beta-mannosyltransferase 9 [Source:Projected from Arabidopsis thaliana (AT5G03760) UniProtKB/Swiss-Prot;Acc:Q9LZR3]
Coordinates
chr10:-:63445464..63451789
Molecular Weight (calculated)
61469.6 Da
IEP (calculated)
9.064
GRAVY (calculated)
0.171
Length
533 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRFSSTTLF PDTLAGTRDD LTEQWTIIWE QIKAPLIVPL LRIAVFLCLL MSILLFIERV YMGIVITLVK MFGRKPDKRY KWESLKDDVE IGNSCYPMVL
101: VQIPMYNEKE VYQLSIGAAC GLSWPSDRII IQVLDDSTDP IIKNLVSMEC QRWASKGIDI KYEIRDNRNG YKAGALKEGL KHPYVKQCDY VAIFDADFQP
201: EPDFLWRTIP FLVHNPQLGL VQARWKFVNA DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGVW RIAALEEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLSALK VKNELPSTFK AYRYQQHRWS CGPANLFRKM FMEIIRNKKV SLWKKIHVIY SFFFVRKVVA HIVTFVFYCV VLPATVLVPE VEVPKWGAVY
401: IPSIITILNA VGTPRSLHLI IFWILFENVM SLHRTKATFI GLLEAGRVNE WIVTEKLGDV LKMKSAIKAV KKPRFRFGDR LLLLELATGA YLFFCGCYDV
501: AFGKNHYFLY LFLQAFAFFI IGFGHIGTFV PNS
101: VQIPMYNEKE VYQLSIGAAC GLSWPSDRII IQVLDDSTDP IIKNLVSMEC QRWASKGIDI KYEIRDNRNG YKAGALKEGL KHPYVKQCDY VAIFDADFQP
201: EPDFLWRTIP FLVHNPQLGL VQARWKFVNA DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGVW RIAALEEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLSALK VKNELPSTFK AYRYQQHRWS CGPANLFRKM FMEIIRNKKV SLWKKIHVIY SFFFVRKVVA HIVTFVFYCV VLPATVLVPE VEVPKWGAVY
401: IPSIITILNA VGTPRSLHLI IFWILFENVM SLHRTKATFI GLLEAGRVNE WIVTEKLGDV LKMKSAIKAV KKPRFRFGDR LLLLELATGA YLFFCGCYDV
501: AFGKNHYFLY LFLQAFAFFI IGFGHIGTFV PNS
001: MELGDTTSVI PDSFMGYRDD ITMQMSMVLD QIRAPLIVPA LRLGVYICLT MSVMLFVERV YMGIVISLVK LFGRKPDKRF KYEPIKDDIE LGNSAYPMVL
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH
Arabidopsis Description
CSLA9RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.