Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- golgi 2
- extracellular 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400070323 | Potato | plasma membrane, plastid | 96.6 | 96.42 |
| Solyc05g055410.1.1 | Tomato | plasma membrane | 73.35 | 73.76 |
| TraesCS7B01G296100.1 | Wheat | mitochondrion, plasma membrane | 67.49 | 68.79 |
| Solyc09g009010.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 38.75 | 68.56 |
| Solyc10g083670.1.1 | Tomato | plasma membrane | 69.0 | 68.48 |
| TraesCS7A01G394000.1 | Wheat | plasma membrane | 66.92 | 68.34 |
| TraesCS7D01G389400.1 | Wheat | plasma membrane | 65.78 | 67.97 |
| HORVU7Hr1G092910.2 | Barley | plasma membrane | 65.41 | 67.18 |
| TraesCS7A01G393800.1 | Wheat | plasma membrane | 65.41 | 67.18 |
| TraesCS7A01G394100.1 | Wheat | plasma membrane | 65.78 | 67.18 |
| TraesCS7B01G295800.1 | Wheat | plasma membrane | 65.22 | 66.99 |
| TraesCS7B01G296000.1 | Wheat | plasma membrane, plastid | 65.22 | 66.09 |
| GSMUA_Achr6P07540_001 | Banana | plasma membrane | 65.6 | 65.72 |
| TraesCS7D01G389500.1 | Wheat | plasma membrane, plastid | 64.65 | 65.39 |
| Zm00001d046681_P001 | Maize | plasma membrane | 64.65 | 65.02 |
| Os06t0625700-01 | Rice | plasma membrane | 64.46 | 64.71 |
| HORVU7Hr1G092990.4 | Barley | endoplasmic reticulum | 57.66 | 63.94 |
| Solyc11g066820.1.1 | Tomato | plasma membrane | 62.95 | 63.55 |
| KXG20409 | Sorghum | plasma membrane, plastid | 64.27 | 63.43 |
| Solyc06g074630.2.1 | Tomato | plasma membrane | 63.89 | 63.41 |
| TraesCS7D01G389100.1 | Wheat | plasma membrane | 62.19 | 59.28 |
| Solyc02g089640.2.1 | Tomato | plasma membrane | 42.34 | 34.25 |
| Solyc12g088240.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 44.05 | 33.87 |
| Solyc08g006310.2.1 | Tomato | golgi, peroxisome, plasma membrane | 44.42 | 33.86 |
| Solyc09g057640.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 42.16 | 32.51 |
| Solyc04g077470.2.1 | Tomato | plasma membrane | 44.8 | 31.94 |
Protein Annotations
| EnsemblPlants:Solyc11g007600.1.1 | EnsemblPlantsGene:Solyc11g007600.1 | Gene3D:3.90.550.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF21 | PFAM:PF13641 | SEG:seg |
| SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI000276A41D | UniProt:K4D521 | MapMan:21.2.3.1.1.1 | : |
Description
No Description!
Coordinates
chr11:-:1854302..1857613
Molecular Weight (calculated)
61113.0 Da
IEP (calculated)
9.404
GRAVY (calculated)
0.128
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAIFSSSQA LLNAHSGITN HVGFIWQQTR TPLVVQFLRL ILYVCLALSF MLFVERLYMG IVIAFVKLFR RKPEKKYKWE PLKGDLELGN YSYPMVLVQI
101: PMCNEKEVYQ LSIGAACNLS WPANRIFIQV LDDSTDPTIK ALVEQECRRW ASKGVNIKYE IRDNRKGYKA GALREGMKHS YVKLCSHVAI FDADFQPEPD
201: FLERSIPFLV HNPEIGLVQA RWEFVNAEEC LMTKMQEMSF GYHFTVEQEV GSTAHAFFGF NGTAGVWRMS ALIEAGGWKD RTTVEDMDLA VRAGLNGWKF
301: VYVDDLKVKS ELPSTFRAYR NQQHRWSCGP ANLFRKMAME IATNKKVSVW KKFYLIYSFF FVRKIIAHVV TFILYCVVIP ATIFIPEVQV PRWGTIYIPT
401: AITVLNILGS ARSMQLVVYW ILFENVMSLH RTKAMLIGLF ESERVNEWIV TEKLGDALKT KKGSKALKRL QFRVGERVHV LELFVGLYLL FCGWYDYSFG
501: RNKFYVYLLL QAMAFFVVGF GYVGVFVHE
101: PMCNEKEVYQ LSIGAACNLS WPANRIFIQV LDDSTDPTIK ALVEQECRRW ASKGVNIKYE IRDNRKGYKA GALREGMKHS YVKLCSHVAI FDADFQPEPD
201: FLERSIPFLV HNPEIGLVQA RWEFVNAEEC LMTKMQEMSF GYHFTVEQEV GSTAHAFFGF NGTAGVWRMS ALIEAGGWKD RTTVEDMDLA VRAGLNGWKF
301: VYVDDLKVKS ELPSTFRAYR NQQHRWSCGP ANLFRKMAME IATNKKVSVW KKFYLIYSFF FVRKIIAHVV TFILYCVVIP ATIFIPEVQV PRWGTIYIPT
401: AITVLNILGS ARSMQLVVYW ILFENVMSLH RTKAMLIGLF ESERVNEWIV TEKLGDALKT KKGSKALKRL QFRVGERVHV LELFVGLYLL FCGWYDYSFG
501: RNKFYVYLLL QAMAFFVVGF GYVGVFVHE
001: MELGDTTSVI PDSFMGYRDD ITMQMSMVLD QIRAPLIVPA LRLGVYICLT MSVMLFVERV YMGIVISLVK LFGRKPDKRF KYEPIKDDIE LGNSAYPMVL
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH
Arabidopsis Description
CSLA9RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.