CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

cytosol 1
plastid 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046681_P001	Maize	plasma membrane	86.19	87.83
TraesCS7D01G389400.1	Wheat	plasma membrane	78.17	81.84
TraesCS7A01G394000.1	Wheat	plasma membrane	78.73	81.47
TraesCS7B01G296100.1	Wheat	mitochondrion, plasma membrane	78.73	81.31
TraesCS7B01G296000.1	Wheat	plasma membrane, plastid	77.43	79.5
TraesCS7D01G389500.1	Wheat	plasma membrane, plastid	77.43	79.35
TraesCS7A01G394100.1	Wheat	plasma membrane	76.49	79.15
HORVU7Hr1G092910.2	Barley	plasma membrane	74.44	77.48
Os06t0625700-01	Rice	plasma membrane	75.56	76.85
HORVU7Hr1G092990.4	Barley	endoplasmic reticulum	68.1	76.52
TraesCS7A01G393800.1	Wheat	plasma membrane	73.51	76.5
TraesCS7B01G295800.1	Wheat	plasma membrane	73.13	76.12
PGSC0003DMT400060105	Potato	cytosol	58.77	72.92
EES06436	Sorghum	plasma membrane	70.52	72.55
GSMUA_Achr6P07540_001	Banana	plasma membrane	71.08	72.16
Solyc05g055410.1.1	Tomato	plasma membrane	66.04	67.3
TraesCS7D01G389100.1	Wheat	plasma membrane	68.47	66.13
PGSC0003DMT400070323	Potato	plasma membrane, plastid	64.37	65.09
Solyc11g007600.1.1	Tomato	plasma membrane	63.43	64.27
OQU76114	Sorghum	plasma membrane	56.72	62.04
EER95427	Sorghum	plasma membrane	60.07	58.87
OQU89056	Sorghum	mitochondrion, plasma membrane	60.07	58.55
KXG25219	Sorghum	plasma membrane	61.38	56.82
KXG30765	Sorghum	plasma membrane	56.72	55.88
OQU91819	Sorghum	plasma membrane	57.65	50.0
EER97593	Sorghum	plasma membrane	51.87	48.52
KXG33450	Sorghum	mitochondrion, peroxisome, plasma membrane	43.66	33.96
KXG34323	Sorghum	plasma membrane	43.1	33.87
EER90820	Sorghum	plasma membrane	42.91	33.24
KXG22328	Sorghum	plasma membrane	43.1	33.14
KXG35666	Sorghum	mitochondrion, plasma membrane	41.98	32.14
KXG24822	Sorghum	peroxisome	41.79	29.47

Protein Annotations

EnsemblPlants:KXG20409	EnsemblPlantsGene:SORBI_3010G197300	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF10	PFAM:PF13641	ProteinID:KXG20409
ProteinID:KXG20409.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0003C65099	UniProt:A0A194YKA1
MapMan:21.2.3.1.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:54044273..54050701

Molecular Weight (calculated)

60391.2 Da

IEP (calculated)

9.000

GRAVY (calculated)

0.245

Length

536 amino acids

Sequence
(BLAST)

001: MAGAAVVPGH YSGSSSGDVV DVAALWQQVK SPVVVPLLRL SVSLCLAMSV MLFAEKVYMA VVLLVSRLPL LGRRYRWEPI VRDGDGDLEA GGGGAAACYP
101: MVLVQIPMYN EREVYHVSIG AACGLSWPSD RIIVQVLDDS TDPVIKELVR AECWRWASKG VNVKYEVRDS RRGYKAGALR DGMKRAYVRG CDVVAIFDAD
201: FQPDPDFLRR TVPFLLHNPD LALVQARWNF VNADECLMTR MQEISLDYHF TVEQEVGSST YAFFGFNGTA GVWRISALNE AGGWKDRTTV EDMDLAVRAS
301: LKGWKFVFLG DLMVKNELPS TLKAYRYQQH RWSCGPANLF RKMLMEIVRN KKVTLWKKIH VIYNFFLVRK IIAHIVTFVF YCIVIPATVL VPEVEIPKWG
401: SVYIPTIISL LNAVGTPRSV HLIVFWILFE NVMSLHRTKA TFIGLLEAGR VNEWVVTEKL GDALRMKMPA KACKKPRIKI GDRLHILELG VAAYLFFCGC
501: YDIAFGNNHY YIFLFLQSIA FFIVGIGYVG TFVPHS

Best Arabidopsis Sequence Match ( AT5G03760.1 )
(BLAST)

001: MELGDTTSVI PDSFMGYRDD ITMQMSMVLD QIRAPLIVPA LRLGVYICLT MSVMLFVERV YMGIVISLVK LFGRKPDKRF KYEPIKDDIE LGNSAYPMVL
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH

Arabidopsis Description

CSLA9RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.