CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 4
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020560_P001	Maize	mitochondrion, plasma membrane	93.86	93.99
Os09t0428000-00	Rice	cytosol, peroxisome	63.14	91.13
GSMUA_Achr4P02100_001	Banana	plasma membrane	68.86	81.28
GSMUA_Achr4P05880_001	Banana	plasma membrane	67.71	79.0
GSMUA_Achr7P19500_001	Banana	cytosol, peroxisome, plasma membrane	67.86	76.99
GSMUA_Achr6P01880_001	Banana	golgi, peroxisome, plasma membrane	68.57	76.19
GSMUA_Achr3P28000_001	Banana	plasma membrane	68.14	74.88
KRH47014	Soybean	cytosol, golgi, peroxisome, plastid	70.14	70.95
KRH44638	Soybean	cytosol	69.71	70.01
GSMUA_Achr7P19790_001	Banana	mitochondrion	13.57	69.34
EER90820	Sorghum	plasma membrane	65.29	66.04
KXG22328	Sorghum	plasma membrane	64.0	64.28
KXG34323	Sorghum	plasma membrane	62.43	64.08
KXG33450	Sorghum	mitochondrion, peroxisome, plasma membrane	61.86	62.84
KXG24822	Sorghum	peroxisome	68.14	62.76
EES06436	Sorghum	plasma membrane	33.14	44.53
OQU76114	Sorghum	plasma membrane	30.0	42.86
KXG20409	Sorghum	plasma membrane, plastid	32.14	41.98
EER95427	Sorghum	plasma membrane	31.86	40.77
KXG30765	Sorghum	plasma membrane	30.86	39.71
OQU89056	Sorghum	mitochondrion, plasma membrane	30.43	38.73
EER97593	Sorghum	plasma membrane	31.43	38.39
KXG25219	Sorghum	plasma membrane	31.29	37.82
OQU91819	Sorghum	plasma membrane	31.29	35.44

Protein Annotations

EnsemblPlants:KXG35666	EnsemblPlantsGene:SORBI_3002G208200	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF7	PFAM:PF13641	ProteinID:KXG35666
ProteinID:KXG35666.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0003C655AB	UniProt:A0A1B6QCL1
MapMan:21.2.1.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:59986843..59990807

Molecular Weight (calculated)

79844.6 Da

IEP (calculated)

8.711

GRAVY (calculated)

0.087

Length

700 amino acids

Sequence
(BLAST)

001: MVPGLGLAYS WGRDARRGTP VVVTMENPNY SVVEIDGPEA EALQAGVPVP PPTDKGRGRS AKQFTWVLLL RAHRAAGCLA SLAAVTWALP SAVAKRFRRA
101: AAAEGLGHGR GWLLYRFIKA LLALSMLALT VELAAYWNGW HFQRPNLTVP ELHVLEVEDI QGWLHTAYLA WMSFRADYIR RPIEFLSKVC ILLFVVQSLD
201: RLALCIGCFW IKLRKIKPRI EGDPFREGSG YLHPMVLVQI PMCNEKEVYE QSISAVCQLD WPRDKFLIQV LDDSSDESIQ MLIKAEVSKW NQLGVNIIYR
301: HRVLRTGYKA GNLNSAMSYD YVKNFEFVAI FDADFQPSPD FLKKTIPHFE GNPEVGLVQA RWSFVNKDEN LLTRLQNINL CFHFEVEQQV NGVFLNFFGF
401: NGTAGVWRIQ ALEESGGWLE RTTVEDMDIA VRAHLNGWKF IFLNDVKVLC EVPESYEAYR KQQHRWHSGP MHLFRLCLPD IITAKISSWK KANLILLFFL
501: LRKLILPFYS FTLFCVILPL TMFVPEAELP VWVICYVPVF MSFLNILPSP RSFPFIVPYL LFENTMSVTK FNAMVSGLFK LGSSYEWVVT KKSGRSSELD
601: LLTSSEKNRK CITLPQLQKQ LPEKNELIEI NVPKEQHEKV PHDAKKANKI YKKELALSLL LLTAATRSLL SAQGIHFYFL LFQGVSFLVV GLDLIGEQIS

Best Arabidopsis Sequence Match ( AT4G31590.1 )
(BLAST)

001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS

Arabidopsis Description

CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.