CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037235_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	89.8	81.48
TraesCS7B01G093900.1	Wheat	plasma membrane	83.67	74.95
TraesCS7D01G190000.1	Wheat	plasma membrane	83.27	74.86
TraesCS7A01G189100.2	Wheat	plasma membrane	83.06	73.87
GSMUA_Achr9P26980_001	Banana	plasma membrane	44.08	72.24
HORVU7Hr1G038440.1	Barley	cytosol, nucleus	82.65	71.18
GSMUA_Achr9P26970_001	Banana	endoplasmic reticulum, extracellular	25.31	65.26
KXG20409	Sorghum	plasma membrane, plastid	62.04	56.72
EER95427	Sorghum	plasma membrane	62.24	55.76
EES06436	Sorghum	plasma membrane	57.76	54.32
Os06t0230100-00	Rice	nucleus	67.96	53.88
KXG25219	Sorghum	plasma membrane	60.2	50.95
OQU91819	Sorghum	plasma membrane	61.43	48.71
KXG30765	Sorghum	plasma membrane	53.88	48.53
EER97593	Sorghum	plasma membrane	56.12	47.99
OQU89056	Sorghum	mitochondrion, plasma membrane	53.27	47.45
KXG33450	Sorghum	mitochondrion, peroxisome, plasma membrane	43.06	30.62
KXG34323	Sorghum	plasma membrane	42.24	30.35
KXG35666	Sorghum	mitochondrion, plasma membrane	42.86	30.0
EER90820	Sorghum	plasma membrane	42.24	29.91
KXG22328	Sorghum	plasma membrane	42.45	29.84
KXG24822	Sorghum	peroxisome	42.24	27.24

Protein Annotations

EnsemblPlants:OQU76114	EnsemblPlantsGene:SORBI_3010G093500	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21	PFAM:PF13641	ProteinID:OQU76114
ProteinID:OQU76114.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0009DC8B1A	UniProt:A0A1W0VS92
MapMan:21.2.3.1.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:8309032..8317239

Molecular Weight (calculated)

55623.4 Da

IEP (calculated)

7.929

GRAVY (calculated)

0.092

Length

490 amino acids

Sequence
(BLAST)

001: MLLADAVFLA AASLLARRRR PYRAPGPIAS AGPAAEEEDD GDGDEEAGRT VGYPVVLVQI PMYNEREVYK LSIGAACGMS WPSDRVIVQV LDDSTDPTVK
101: DLVELECKFW ANKGKNVKYE VRNNRKGYKA GALKQGMLYD YVQQCDFVAV FDADFQPEPD FLMRTIPYLV HNPRIGLVQA RWEFVNHNEF LMTRIQKMTL
201: DYHFKVEQEA GSSIFGFFGF NGTAGVWRIS SIKEAGGWED RTTVEDMDLA VRAGLKGWKF IYVGDVKVKS ELPSNLKAYR RQQHRWTCGA ANLFRKTGVE
301: IILTKEVSLW RKLYLIYSFF FIRKVVAHVV PFMLYCVVIP LSVLIPEVSV PVWGVVYIPT TITLLYAIRN PSSIHFIPFW ILFENVMSFH RTKATFIGLL
401: ELGSVNEWVV TEKLGNSNGT KSVPQILEKP RCRFWDRCII SEILVAAFLF FCATYNLVLG DDFYFVYIYL QAITFLIVGT GFCGTSSSNS

Best Arabidopsis Sequence Match ( AT1G23480.1 )
(BLAST)

001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV

Arabidopsis Description

CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.