CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012666_P003	Maize	plasma membrane	94.63	94.77
Os01t0766900-01	Rice	golgi, plasma membrane	23.51	94.19
Zm00001d043336_P001	Maize	plasma membrane	90.86	91.65
TraesCS3B01G337100.1	Wheat	plasma membrane	88.97	87.82
HORVU3Hr1G074570.1	Barley	plasma membrane	88.68	87.79
TraesCS3A01G299500.1	Wheat	plasma membrane	89.26	87.36
TraesCS3D01G302300.1	Wheat	plasma membrane	88.82	86.93
KXG22328	Sorghum	plasma membrane	86.5	85.51
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	71.12	78.78
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	64.01	77.78
GSMUA_Achr7P00750_001	Banana	plasma membrane	69.67	76.92
GSMUA_Achr6P30200_001	Banana	cytosol	68.8	76.82
GSMUA_Achr4P32270_001	Banana	plasma membrane	71.12	76.8
GSMUA_Achr5P01920_001	Banana	plasma membrane	71.26	76.24
EER90820	Sorghum	plasma membrane	75.33	75.0
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	74.89	73.3
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	73.58	72.53
Bra000635.1-P	Field mustard	plasma membrane	72.57	72.25
CDX83148	Canola	plasma membrane	72.57	72.25
KRH15467	Soybean	plasma membrane	72.57	71.53
KRH52142	Soybean	plasma membrane	72.71	70.96
AT4G07960.1	Thale cress	plasma membrane	71.55	70.53
KRH61452	Soybean	plasma membrane	72.42	70.48
PGSC0003DMT400030125	Potato	plasma membrane	67.34	69.67
KXG34323	Sorghum	plasma membrane	68.65	69.35
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	69.09	69.19
Solyc04g077470.2.1	Tomato	plasma membrane	71.84	66.71
PGSC0003DMT400012668	Potato	plasma membrane	71.7	66.58
KXG35666	Sorghum	mitochondrion, plasma membrane	62.84	61.86
KXG24822	Sorghum	peroxisome	63.72	57.76
EES06436	Sorghum	plasma membrane	33.38	44.15
KXG20409	Sorghum	plasma membrane, plastid	33.96	43.66
OQU76114	Sorghum	plasma membrane	30.62	43.06
EER95427	Sorghum	plasma membrane	32.08	40.4
OQU89056	Sorghum	mitochondrion, plasma membrane	31.64	39.64
KXG30765	Sorghum	plasma membrane	31.06	39.34
EER97593	Sorghum	plasma membrane	32.51	39.09
KXG25219	Sorghum	plasma membrane	31.64	37.65
OQU91819	Sorghum	plasma membrane	31.35	34.95

Protein Annotations

EnsemblPlants:KXG33450	EnsemblPlantsGene:SORBI_3003G308100	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	ncoils:Coil	PANTHER:PTHR32044	PANTHER:PTHR32044:SF46	PFAM:PF13641
ProteinID:KXG33450	ProteinID:KXG33450.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI00081ADE21
UniProt:A0A1B6Q6A9	MapMan:21.2.1.1.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:63669915..63674144

Molecular Weight (calculated)

76814.5 Da

IEP (calculated)

8.507

GRAVY (calculated)

0.089

Length

689 amino acids

Sequence
(BLAST)

001: MAQWWGREAR GGGGGGGTSV VVKMESPDWA VPGSAAAGGK AGRGKNARQI TWVLLLKAHR AAGKLTGAAS AALSVAAAAR RRVAAGRTDD DVDADEAGAA
101: ATPGESPALR ARLYGFLRVF LLLSMLLLAV DVAAHLQGWH LAVDVPDLLA VEGLFAAGYA SWVRVRLEYL APALQFMANA CVVLFLIQSA DRLILCLGCL
201: WIKLKGIKPV PKAAGKGSDD DVEADTTGEF PMVLVQIPMC NEKEVYQQSI GAVCGLDWPR PNFLVQVLDD SDDAATSALI KEEVEKWQRE GVRILYRHRV
301: IRDGYKAGNL KSAMNCSYVK DYEFVVIFDA DFQPQPDFLK RTVPHFKGNE DVGLVQARWS FVNKDENLLT RLQNINLCFH FEVEQQVNGI FLNFFGFNGT
401: AGVWRIKALE DSGGWMERTT VEDMDIAVRA HLKGWKFMFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCFVDIIK SKIGFWKKFN LIFLFFLLRK
501: LILPFYSFTL FCIILPMTMF IPEAELPAWV VCYIPATMSL LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS GRSSEGDLIA
601: LVEKQSKQQR VGSAPNLDSL TKESSNLKKD SKKKKHNRIY RKELALSFLL LTAAARSLLS VQGIHFYFLL FQGVSFLVVG LDLIGEQVE

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.