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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • endoplasmic reticulum 2
  • golgi 2
  • plasma membrane 4
  • extracellular 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
MultiLoc:endoplasmic reticulum
Plant-mPloc:golgi, plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g088240.1.1 Tomato cytosol, peroxisome, plasma membrane 97.45 94.33
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 68.02 79.89
Os01t0766900-01 Rice golgi, plasma membrane 20.57 79.65
PGSC0003DMT400012668 Potato plasma membrane 84.68 76.01
AT4G07960.1 Thale cress plasma membrane 78.98 75.25
VIT_18s0001g08580.t01 Wine grape cytosol, peroxisome, plasma membrane 78.83 75.11
Bra000635.1-P Field mustard plasma membrane 77.33 74.42
CDX83148 Canola plasma membrane 77.18 74.28
KRH15467 Soybean plasma membrane 77.18 73.53
GSMUA_Achr5P01920_001 Banana plasma membrane 70.87 73.29
GSMUA_Achr6P30200_001 Banana cytosol 67.72 73.1
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 68.17 72.99
GSMUA_Achr7P00750_001 Banana plasma membrane 68.32 72.92
KRH52142 Soybean plasma membrane 76.73 72.38
KRH61452 Soybean plasma membrane 76.88 72.32
GSMUA_Achr4P32270_001 Banana plasma membrane 68.47 71.47
Os03t0770800-01 Rice plasma membrane 63.06 70.47
PGSC0003DMT400053633 Potato endoplasmic reticulum, plasma membrane, vacuole 18.32 69.32
GSMUA_Achr4P23120_001 Banana cytosol, peroxisome, plasma membrane 72.82 68.89
Os05t0510800-01 Rice plasma membrane 70.42 68.17
EER90820 Sorghum plasma membrane 70.12 67.49
KXG33450 Sorghum mitochondrion, peroxisome, plasma membrane 69.67 67.34
KXG22328 Sorghum plasma membrane 70.42 67.29
Zm00001d012666_P003 Maize plasma membrane 69.22 67.01
Zm00001d043336_P001 Maize plasma membrane 68.47 66.76
TraesCS5A01G405700.1 Wheat mitochondrion 70.27 66.57
Zm00001d034205_P001 Maize plasma membrane 70.42 66.15
Zm00001d038676_P001 Maize plasma membrane 69.52 65.95
TraesCS5B01G410400.1 Wheat mitochondrion 70.27 65.73
Zm00001d013168_P001 Maize plasma membrane 67.57 65.6
TraesCS1A01G331800.1 Wheat plasma membrane 68.92 65.38
TraesCS1D01G334400.1 Wheat plasma membrane 68.77 65.24
TraesCS1B01G345400.1 Wheat plasma membrane 68.77 65.24
HORVU1Hr1G077230.2 Barley plasma membrane 68.47 65.24
HORVU1Hr1G067470.1 Barley plasma membrane 67.12 65.07
HORVU3Hr1G074570.1 Barley plasma membrane 67.87 64.94
TraesCS3B01G337100.1 Wheat plasma membrane 67.42 64.33
TraesCS3A01G299500.1 Wheat plasma membrane 67.87 64.2
TraesCS1A01G312600.1 Wheat mitochondrion, plasma membrane 66.37 64.06
TraesCS1D01G312700.1 Wheat plasma membrane 66.22 63.91
TraesCS3D01G302300.1 Wheat plasma membrane 67.42 63.78
TraesCS1B01G324200.1 Wheat mitochondrion 65.92 63.62
TraesCS5D01G415700.1 Wheat mitochondrion 70.27 63.59
Os07t0124750-00 Rice plasma membrane 67.87 63.22
PGSC0003DMT400024646 Potato golgi, peroxisome, plasma membrane 65.77 63.11
PGSC0003DMT400026046 Potato plasma membrane 60.96 62.08
KXG34323 Sorghum plasma membrane 63.21 61.73
PGSC0003DMT400095504 Potato plasma membrane 39.79 52.89
PGSC0003DMT400060105 Potato cytosol 30.03 46.3
PGSC0003DMT400070323 Potato plasma membrane, plastid 34.53 43.4
PGSC0003DMT400072644 Potato plasma membrane 33.48 41.84
PGSC0003DMT400007050 Potato mitochondrion 33.33 41.65
PGSC0003DMT400068221 Potato plasma membrane 32.58 41.41
PGSC0003DMT400018425 Potato plasma membrane 33.03 41.28
PGSC0003DMT400009922 Potato plasma membrane 14.11 38.68
Protein Annotations
EnsemblPlants:PGSC0003DMT400030125EnsemblPlantsGene:PGSC0003DMG400011541Gene3D:3.90.550.10GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF45PFAM:PF13641PGSC:PGSC0003DMG400011541
SEG:segSUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI000295A634UniProt:M1ATS6MapMan:21.2.1.1.1
Description
Transferase, transferring glycosyl groups [Source:PGSC_GENE;Acc:PGSC0003DMG400011541]
Coordinates
chr12:+:56115339..56119046
Molecular Weight (calculated)
76582.2 Da
IEP (calculated)
8.317
GRAVY (calculated)
0.047
Length
666 amino acids
Sequence
(BLAST)
001: MENPNNWSMV ELETPSEDDS FLLTKGEKVK NKNAKQLTWV LLLKAHKAAG CLTSIASALF SFGSVIRRRV ATGKTDSSTS NSWFYSCIKV FVWFSLILLG
101: FEIAAYYKGW HFNTYDLHIQ HLYTLANPLA VKGVFDLLYS IWVVVRVEYF APILRSLANV CIVLFFIQSL DRLILCLGCL WIRIWKIKPV LKDGPVDLED
201: GDGGYYPMVL VQIPMCNEKE VYQQAIAAMS SLEWPKSKLL IQILDDSDDS TTQMLIKEEV HKWQKDGVNI VYRHRVIREG YKAGNLKSAM NCSYVKDYEF
301: VAIFDADFQP SPDFLKRTVP YFKDNEDIGL VQARWSFVNK EENLLTRLQH INLAFHFEVE QQVNGVFLNF FGFNGTAGVW RIKALEGSGG WLERTTVEDM
401: DIAVRAHLHG WKFIFLNDVE CQCEVPESYE AYRKQQHRWH SGPMQLFRLC FPAIVESNIS IWKKGNLIFL FFLLRKLILP FYSFTLFCII LPMTMFVPEA
501: TLPTWVVSYI PATMSFLNIL PSPKSFPFIV PYLLFENTMS VTKFNAMISG LFQLGSSYEW IVTKKSGRSS ENDLSLLVDE KPKHQRGTSE PNLGDLKEEF
601: NKKARKSSRK KKHNRIYTKE LALAFLLLTA AVRSLLSAQG IHFYFLLFQG ISFLLVGLDL IGEQVD
Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)
001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE
Arabidopsis Description
CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.