Factsheet for Zm00001d013168_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
nucleus 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90820	Sorghum	plasma membrane	90.82	90.03
Zm00001d034205_P001	Maize	plasma membrane	90.67	87.73
Os03t0770800-01	Rice	plasma membrane	75.22	86.58
TraesCS5A01G405700.1	Wheat	mitochondrion	85.42	83.36
TraesCS5B01G410400.1	Wheat	mitochondrion	86.3	83.15
TraesCS5D01G415700.1	Wheat	mitochondrion	86.3	80.43
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	71.72	79.1
GSMUA_Achr7P00750_001	Banana	plasma membrane	71.72	78.85
GSMUA_Achr4P32270_001	Banana	plasma membrane	73.18	78.68
GSMUA_Achr5P01920_001	Banana	plasma membrane	73.18	77.95
GSMUA_Achr6P30200_001	Banana	cytosol	69.24	76.99
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	61.22	74.07
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	75.66	73.72
Zm00001d012666_P003	Maize	plasma membrane	73.32	73.11
Zm00001d043336_P001	Maize	plasma membrane	72.3	72.62
Zm00001d038676_P001	Maize	plasma membrane	73.91	72.22
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	72.74	71.39
KRH15467	Soybean	plasma membrane	72.45	71.1
Bra000635.1-P	Field mustard	plasma membrane	71.28	70.66
CDX83148	Canola	plasma membrane	71.14	70.52
KRH61452	Soybean	plasma membrane	72.16	69.92
AT4G07960.1	Thale cress	plasma membrane	71.14	69.81
KRH52142	Soybean	plasma membrane	71.72	69.69
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	67.93	67.73
PGSC0003DMT400030125	Potato	plasma membrane	65.6	67.57
Solyc04g077470.2.1	Tomato	plasma membrane	70.7	65.36
PGSC0003DMT400012668	Potato	plasma membrane	70.55	65.23
Zm00001d020560_P001	Maize	mitochondrion, plasma membrane	65.6	64.38
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	62.83	56.94
Zm00001d049336_P001	Maize	plasma membrane	62.97	56.54
Zm00001d009569_P001	Maize	cytosol	8.45	53.7
Zm00001d010680_P002	Maize	cytosol	5.98	47.13
Zm00001d043714_P001	Maize	cytosol	23.91	42.05
Zm00001d046681_P001	Maize	plasma membrane	31.92	41.63
Zm00001d043716_P001	Maize	mitochondrion, plasma membrane	31.92	40.78
Zm00001d037235_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	31.63	40.19
Zm00001d032994_P002	Maize	plasma membrane	30.03	40.08
Zm00001d053696_P003	Maize	plasma membrane	32.94	39.79
Zm00001d050406_P008	Maize	plasma membrane	31.78	38.72
Zm00001d032188_P001	Maize	plasma membrane	31.63	38.07
Zm00001d022230_P001	Maize	vacuole	31.34	37.52
Zm00001d048319_P003	Maize	plasma membrane	30.17	37.3
Zm00001d018032_P001	Maize	plasma membrane	28.86	36.4
Zm00001d010955_P001	Maize	extracellular	9.48	35.14
Zm00001d043719_P001	Maize	plasma membrane	9.77	34.01
Zm00001d005305_P001	Maize	plasma membrane	10.93	33.19

Protein Annotations

EnsemblPlants:Zm00001d013168_P001	EnsemblPlants:Zm00001d013168_T001	EnsemblPlantsGene:Zm00001d013168	EntrezGene:103625842	Gene3D:3.90.550.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF47	PFAM:PF13641	ProteinID:AQK62588.1	SEG:seg
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002217AA6	UniProt:A0A1D6GGB0	MapMan:21.2.1.1.1	:

Description

Probable xyloglucan glycosyltransferase 12

Coordinates

chr5:+:5758534..5762512

Molecular Weight (calculated)

76485.1 Da

IEP (calculated)

8.150

GRAVY (calculated)

0.132

Length

686 amino acids

Sequence
(BLAST)

001: MAPCSGLWGG KAGGDAYRGT PVVVKMENPN WSISEISSPE DDDDDEDILA AAGGRRRKGA RTKNAKQIRW VLLLKAHRAA GCLASLASAA VALGAAARRR
101: VAAGRTDADA DADAGVLAVA GESPVVRSGF YAFIRAFLVV SLLLLAVEVA AYINGWDLAA SALALPALGL ESLYASWLRF RAAYVAPGIQ FLTDACVVLF
201: LVQSADRLIL CLGCFYIRVK RIKPEPKSPA LPDAEDPDAG YYPMVLVQIP MCNEKEVYQQ SIAAVCNLDW PKSSFLVQVL DDSDDLLTQA LIREEVAKWQ
301: QQGARIVYRH RVLRDGYKAG NLKSAMSCSY VKDYEFVAIF DADFQPQPDF LKRTVLHFKD NDELGLVQAR WSFVNKDENL LTRLQYINLC FHFEVEQQVN
401: GVFLNFFGFN GTAGVWRIKA LEDSGGWMER TTVEDMDIAV RAHLHGWKFI FLNDVECQCE LPESYEAYRK QQHRWHSGPM QLFRLCLPDI IKCKMAFWKK
501: GNLILLFFLL RKLILPLYSF TLFCIILPTA MFVPEAELPD WVVCYVPALM SLLNVLPSPR SFPFVIPYLL FENTMSVTKF NAMVSGLFQL GSAYEWVVTK
601: KSGSGPRSSE VAGDLVSLAA AAPTAKKKKK KKHNRIYKKE LALSMLLLTA AARSLLSKQG IHFYFLLFQG VSFLLVGLDL IGEQVE

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.