Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d008871_P001 | |
| Zm00001d010783_P001 | |
| Zm00001d038803_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G07330.1 | Zm00001d008871_P001 | AT3G16310.1 | 21798944 |
| AT3G07330.1 | Zm00001d010783_P001 | AT3G16310.1 | 21798944 |
| AT3G07330.1 | Zm00001d038803_P001 | AT3G16310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400053633 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 41.62 | 43.75 |
| CDX75177 | Canola | cytosol | 22.7 | 14.43 |
| Zm00001d043719_P001 | Maize | plasma membrane | 14.59 | 13.71 |
| Zm00001d005305_P001 | Maize | plasma membrane | 14.59 | 11.95 |
| Solyc09g057640.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 40.54 | 10.93 |
| Zm00001d049336_P001 | Maize | plasma membrane | 43.24 | 10.47 |
| Zm00001d012666_P003 | Maize | plasma membrane | 38.92 | 10.47 |
| Zm00001d024178_P002 | Maize | cytosol, peroxisome, plasma membrane | 42.7 | 10.44 |
| Zm00001d038676_P001 | Maize | plasma membrane | 38.92 | 10.26 |
| GSMUA_Achr6P27800_001 | Banana | plasma membrane | 35.68 | 10.22 |
| Zm00001d034205_P001 | Maize | plasma membrane | 38.38 | 10.01 |
| VIT_00s0580g00010.t01 | Wine grape | plasma membrane, plastid | 40.54 | 9.96 |
| Zm00001d043336_P001 | Maize | plasma membrane | 36.76 | 9.96 |
| KRH07420 | Soybean | plasma membrane | 36.76 | 9.74 |
| AT3G07330.1 | Thale cress | cytosol, peroxisome, plasma membrane | 35.68 | 9.68 |
| KRH66156 | Soybean | endoplasmic reticulum | 36.22 | 9.48 |
| Zm00001d013168_P001 | Maize | plasma membrane | 35.14 | 9.48 |
| Bra001246.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 35.68 | 9.44 |
| Zm00001d020560_P001 | Maize | mitochondrion, plasma membrane | 35.68 | 9.44 |
| Zm00001d043714_P001 | Maize | cytosol | 14.05 | 6.67 |
| Zm00001d032188_P001 | Maize | plasma membrane | 18.92 | 6.14 |
| Zm00001d046681_P001 | Maize | plasma membrane | 16.76 | 5.89 |
| Zm00001d050406_P008 | Maize | plasma membrane | 17.84 | 5.86 |
| Zm00001d053696_P003 | Maize | plasma membrane | 16.22 | 5.28 |
| Zm00001d037235_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 15.14 | 5.19 |
| Zm00001d032994_P002 | Maize | plasma membrane | 13.51 | 4.86 |
| Zm00001d043716_P001 | Maize | mitochondrion, plasma membrane | 14.05 | 4.84 |
| Zm00001d048319_P003 | Maize | plasma membrane | 14.05 | 4.68 |
| Zm00001d022230_P001 | Maize | vacuole | 14.05 | 4.54 |
| Zm00001d018032_P001 | Maize | plasma membrane | 12.43 | 4.23 |
| PGSC0003DMT400095504 | Potato | plasma membrane | 2.7 | 1.0 |
| Zm00001d010680_P002 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d009569_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d010955_P001 | EnsemblPlants:Zm00001d010955_T001 | EnsemblPlantsGene:Zm00001d010955 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| PANTHER:PTHR32044 | PANTHER:PTHR32044:SF7 | ProteinID:AQK95312.1 | SEG:seg | UniParc:UPI00084315CF | UniProt:A0A1D6FV34 |
| MapMan:35.1 | : | : | : | : | : |
Description
Probable xyloglucan glycosyltransferase 12
Coordinates
chr8:-:134937826..134938765
Molecular Weight (calculated)
20677.2 Da
IEP (calculated)
12.933
GRAVY (calculated)
-0.736
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MSILNILPAP KSFPFIIPYL LFENTMSVTK FNAMVSGLFQ LGSSYEWIVT KKAGRTSSAS DILALAEADA HATRRRRRPS SCAASRGRPP GWGRLRSRRP
101: PSGPTRRTPP RLWLPPRPRP RPRRAATRPR SRQTGSSRRS SRLRASSSRP PRGACSPSRA ALLLPALPGR HVPRRRPRPH RRAVS
101: PSGPTRRTPP RLWLPPRPRP RPRRAATRPR SRQTGSSRRS SRLRASSSRP PRGACSPSRA ALLLPALPGR HVPRRRPRPH RRAVS
001: MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS
Arabidopsis Description
CSLC8Probable xyloglucan glycosyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA2]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.