CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04011	Canola	cytosol, peroxisome, plasma membrane	49.14	31.29
CDY00138	Canola	cytosol, peroxisome, plasma membrane	48.8	31.07
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	57.04	29.28
CDX83148	Canola	plasma membrane	57.73	24.28
CDY47369	Canola	plasma membrane	24.05	23.33
CDY47235	Canola	plasma membrane	25.77	23.01
Zm00001d010955_P001	Maize	extracellular	14.43	22.7
CDY68733	Canola	plasma membrane	20.96	22.43
CDX85189	Canola	plasma membrane	49.83	22.07
CDX86448	Canola	plasma membrane	49.83	22.07
CDY20029	Canola	plasma membrane	49.83	22.04
CDX72314	Canola	plasma membrane	51.2	21.78
CDY13445	Canola	plasma membrane	51.2	21.69
CDX76802	Canola	plasma membrane	48.8	21.52
CDY34762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	49.14	20.91
CDY08003	Canola	cytosol, peroxisome, plasma membrane	47.42	19.86
CDX74051	Canola	cytosol, peroxisome, plasma membrane	47.42	19.74
CDX68766	Canola	plasma membrane	51.2	19.23
CDY60854	Canola	plasma membrane	51.2	17.03
CDX70677	Canola	cytosol, peroxisome, plasma membrane	25.77	16.93
CDX69464	Canola	cytosol, peroxisome, plasma membrane	25.43	16.7
CDY32110	Canola	mitochondrion	23.02	15.23
CDX78675	Canola	plasma membrane	25.43	14.68
CDY01129	Canola	plasma membrane	26.8	14.5
CDY35710	Canola	plasma membrane	25.43	14.48
CDY26505	Canola	plasma membrane	25.43	14.43
CDY57881	Canola	extracellular	6.19	14.4
CDY04707	Canola	plasma membrane	27.15	14.23
CDY44151	Canola	plasma membrane	27.15	14.23
CDY09164	Canola	plasma membrane	24.74	14.12
CDX71011	Canola	plasma membrane	24.74	14.12
CDX88785	Canola	plasma membrane	24.74	14.12
CDY26949	Canola	plasma membrane	24.74	14.12
CDX72181	Canola	plasma membrane	24.74	13.77
CDY54604	Canola	plasma membrane	24.74	13.74
CDX70286	Canola	plasma membrane	25.09	13.72
CDY11268	Canola	plasma membrane	25.09	13.72
CDY10358	Canola	plasma membrane	25.09	13.72
CDX90506	Canola	plasma membrane	25.43	13.38
CDY40295	Canola	plasma membrane	25.09	13.37
CDY09672	Canola	golgi	16.15	13.35
CDX79614	Canola	plasma membrane	25.09	13.25
CDY32098	Canola	plasma membrane	23.37	12.52
CDY40448	Canola	plasma membrane	23.37	11.49
CDX80885	Canola	plasma membrane	18.56	10.29
CDX84607	Canola	mitochondrion	4.12	10.0
CDX92340	Canola	plasma membrane	24.74	7.62
CDY32100	Canola	cytosol	0.34	5.88
CDY47368	Canola	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:CDX75177	EnsemblPlantsGene:GSBRNA2T00119099001	GO:A0A078CEC2	PANTHER:PTHR32044	PANTHER:PTHR32044:SF45	ProteinID:CDX75177
ProteinID:CDX75177.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE5AD5	MapMan:35.1	:

Description

BnaC09g25050D

Coordinates

chrLK031803:+:2194015..2196335

Molecular Weight (calculated)

33828.1 Da

IEP (calculated)

7.462

GRAVY (calculated)

-0.060

Length

291 amino acids

Sequence
(BLAST)

001: MNGRRKDNEE QGLEHERWSF VNREENLLTR LQNINLAFHF ECVEDLERTT AEDMDIAVRA YLHGWKFIFL NDVESKIDLI PNLHSAFETM LIPRKVCISH
101: TFQWYLRSRR NKSEFDTISG EELRGRGEDG FWSIQLVRSP NWTGPARRTA DLDCLLGRSL NWTGPARRTA ELNPVVDPAR PFDELIIRPL ISIGKKFNLI
201: FFFFLLKKLI LPFNSFTLFC IILPMTMFVP KTELPAWVVC YIPSTMSFLN ILPAPKSFPF IVPYLLFDNT MSVTKFNAMV SGLFQLGSAY E

Best Arabidopsis Sequence Match ( AT2G24630.1 )
(BLAST)

001: MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS

Arabidopsis Description

CSLC8Probable xyloglucan glycosyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA2]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.