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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09164 Canola plasma membrane 99.02 99.22
CDY26949 Canola plasma membrane 98.24 98.43
CDX71011 Canola plasma membrane 97.46 97.65
CDX88785 Canola plasma membrane 97.26 97.45
AT5G22740.1 Thale cress plasma membrane 97.26 93.07
KRH30518 Soybean endoplasmic reticulum 82.97 78.23
KRH22736 Soybean plasma membrane 81.41 78.05
KRH25159 Soybean endoplasmic reticulum 82.19 77.35
VIT_06s0061g01230.t01 Wine grape plasma membrane 78.86 75.61
Solyc11g066820.1.1 Tomato plasma membrane 76.13 74.24
PGSC0003DMT400068221 Potato plasma membrane 75.73 73.86
Solyc06g074630.2.1 Tomato plasma membrane 76.32 73.17
PGSC0003DMT400018425 Potato plasma membrane 76.32 73.17
TraesCS6A01G169200.1 Wheat plasma membrane 71.04 70.08
HORVU6Hr1G034630.10 Barley plasma membrane 70.65 69.69
TraesCS6B01G197200.1 Wheat plasma membrane 70.65 69.69
TraesCS6D01G158600.1 Wheat plasma membrane 70.65 69.69
CDY10358 Canola plasma membrane 72.41 69.55
CDX70286 Canola plasma membrane 72.21 69.36
CDY11268 Canola plasma membrane 72.02 69.17
Os02t0192500-01 Rice cytosol, endoplasmic reticulum, plasma membrane 70.25 68.91
EES06436 Sorghum plasma membrane 68.69 67.37
CDY47369 Canola plasma membrane 36.99 63.0
Zm00001d053696_P003 Maize plasma membrane 68.69 61.8
CDY09672 Canola golgi 41.29 59.94
CDX69464 Canola cytosol, peroxisome, plasma membrane 51.86 59.82
CDX70677 Canola cytosol, peroxisome, plasma membrane 50.88 58.69
CDX80885 Canola plasma membrane 59.1 57.52
CDX78675 Canola plasma membrane 56.56 57.34
CDY26505 Canola plasma membrane 56.75 56.53
CDY44151 Canola plasma membrane 60.08 55.32
CDY01129 Canola plasma membrane 57.73 54.83
CDY04707 Canola plasma membrane 59.49 54.77
CDX79614 Canola plasma membrane 58.32 54.08
CDX72181 Canola plasma membrane 55.19 53.92
CDY54604 Canola plasma membrane 55.19 53.82
CDY68733 Canola plasma membrane 28.38 53.31
CDY32098 Canola plasma membrane 56.56 53.22
CDY32110 Canola mitochondrion 45.79 53.18
CDX92340 Canola plasma membrane 98.24 53.12
CDY40295 Canola plasma membrane 56.56 52.93
CDY47368 Canola endoplasmic reticulum, extracellular 5.87 51.72
CDX90506 Canola plasma membrane 54.6 50.45
CDY40448 Canola plasma membrane 57.14 49.32
CDY32100 Canola cytosol 1.57 47.06
CDY04011 Canola cytosol, peroxisome, plasma membrane 38.75 43.33
CDY00138 Canola cytosol, peroxisome, plasma membrane 37.77 42.23
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 40.9 36.86
CDX84607 Canola mitochondrion 7.83 33.33
CDX86448 Canola plasma membrane 42.47 33.03
CDX85189 Canola plasma membrane 42.47 33.03
CDY57881 Canola extracellular 8.02 32.8
CDY20029 Canola plasma membrane 41.68 32.37
CDX76802 Canola plasma membrane 41.29 31.97
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 41.49 30.99
CDX72314 Canola plasma membrane 41.29 30.85
CDY13445 Canola plasma membrane 41.29 30.71
CDX83148 Canola plasma membrane 41.49 30.64
CDY08003 Canola cytosol, peroxisome, plasma membrane 40.51 29.78
CDX74051 Canola cytosol, peroxisome, plasma membrane 40.31 29.47
CDX68766 Canola plasma membrane 41.49 27.35
CDX75177 Canola cytosol 14.48 25.43
CDY60854 Canola plasma membrane 41.49 24.23
CDY47235 Canola plasma membrane 10.18 15.95
Protein Annotations
EnsemblPlants:CDY35710EnsemblPlantsGene:GSBRNA2T00059128001Gene3D:3.90.550.10GO:A0A078HBD1GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF17PFAM:PF13641
ProteinID:CDY35710ProteinID:CDY35710.1SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EEA28FUniProt:A0A078HBD1
MapMan:21.2.3.1.1.1:::::
Description
BnaC02g09760DBnaC02g09760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBD1]
Coordinates
chrLK032358:-:310698..315903
Molecular Weight (calculated)
59106.8 Da
IEP (calculated)
9.286
GRAVY (calculated)
0.165
Length
511 amino acids
Sequence
(BLAST)
001: MDGVSPKFVL PETFDGVKME ITGQLGMIWE LVKAPVIVPL LQLAVYICLL MSLMLLCERV YMGTVIVLVK LFWKKPEKRY KFEPIHDDEE LGSSNFPVVL
101: VQIPMFNERE VYKLSIGAAS GLSWPSDRLV IQVLDDSTDP TVKQMVEMEC QRWASKGINI TYQIRENRVG YKAGALKEGL KRSYVKHCEY VVIFDADFQP
201: EPDFLRRSIP FLVHNPNIAL VQARWRFVNS DECLLTRMQE MSLDYHFTVE QEVGSSTHAF FGFNGTAGIW RIAAINEAGG WKDRTTVEDM DLAVRASLRG
301: WKFLYLGDLQ VKSELPSTFR AFRFQQHRWS CGPANLFRKM VMEIIRNKKV RFWKKVYVIY SFFFVRKVIA HWVTFCFYCV VLPLTILVPE VKVPIWGSVY
401: IPSIITVLNS VGTPRSIHLL FYWILFENVM SLHRTKATLI GLNTKGLKKF PRIFKLPDRL NTLELGFAAF LFVCGCYDYV HGKNNYFIYL FLQTMSFFIS
501: GLGWIGTYVP S
Best Arabidopsis Sequence Match ( AT5G22740.1 )
(BLAST)
001: MDGVSPKFVL PETFDGVRME ITGQLGMIWE LVKAPVIVPL LQLAVYICLL MSVMLLCERV YMGIVIVLVK LFWKKPDKRY KFEPIHDDEE LGSSNFPVVL
101: VQIPMFNERE VYKLSIGAAC GLSWPSDRLV IQVLDDSTDP TVKQMVEVEC QRWASKGINI RYQIRENRVG YKAGALKEGL KRSYVKHCEY VVIFDADFQP
201: EPDFLRRSIP FLMHNPNIAL VQARWRFVNS DECLLTRMQE MSLDYHFTVE QEVGSSTHAF FGFNGTAGIW RIAAINEAGG WKDRTTVEDM DLAVRASLRG
301: WKFLYLGDLQ VKSELPSTFR AFRFQQHRWS CGPANLFRKM VMEIVRNKKV RFWKKVYVIY SFFFVRKIIA HWVTFCFYCV VLPLTILVPE VKVPIWGSVY
401: IPSIITILNS VGTPRSIHLL FYWILFENVM SLHRTKATLI GLFEAGRANE WVVTAKLGSG QSAKGNTKGI KRFPRIFKLP DRLNTLELGF AAFLFVCGCY
501: DFVHGKNNYF IYLFLQTMSF FISGLGWIGT YVPS
Arabidopsis Description
CSLA2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUD8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.