Factsheet for PGSC0003DMT400068221

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plastid 1
endoplasmic reticulum 2
golgi 2
extracellular 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g066820.1.1	Tomato	plasma membrane	98.66	98.66
PGSC0003DMT400018425	Potato	plasma membrane	88.93	87.43
VIT_06s0061g01230.t01	Wine grape	plasma membrane	77.86	76.55
KRH22736	Soybean	plasma membrane	77.29	75.98
CDY35710	Canola	plasma membrane	73.86	75.73
AT5G22740.1	Thale cress	plasma membrane	77.1	75.66
CDX71011	Canola	plasma membrane	73.47	75.49
CDX88785	Canola	plasma membrane	73.47	75.49
CDY09164	Canola	plasma membrane	73.47	75.49
Bra006633.1-P	Field mustard	plasma membrane	73.28	75.29
CDY26949	Canola	plasma membrane	73.09	75.1
Bra020212.1-P	Field mustard	plasma membrane	76.53	75.09
KRH30518	Soybean	endoplasmic reticulum	77.48	74.91
KRH25159	Soybean	endoplasmic reticulum	77.1	74.4
PGSC0003DMT400060105	Potato	cytosol	57.82	70.14
PGSC0003DMT400072644	Potato	plasma membrane	70.42	69.23
TraesCS6A01G169200.1	Wheat	plasma membrane	67.56	68.34
TraesCS6B01G197200.1	Wheat	plasma membrane	67.37	68.15
TraesCS6D01G158600.1	Wheat	plasma membrane	67.18	67.95
HORVU6Hr1G034630.10	Barley	plasma membrane	67.18	67.95
Os02t0192500-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	67.56	67.95
PGSC0003DMT400007050	Potato	mitochondrion	68.51	67.35
EES06436	Sorghum	plasma membrane	65.27	65.64
PGSC0003DMT400070323	Potato	plasma membrane, plastid	64.12	63.4
PGSC0003DMT400009922	Potato	plasma membrane	28.82	62.14
Zm00001d053696_P003	Maize	plasma membrane	64.89	59.86
Bra002426.1-P	Field mustard	plasma membrane	76.34	41.28
CDX92340	Canola	plasma membrane	73.28	40.63
PGSC0003DMT400026046	Potato	plasma membrane	42.37	33.95
PGSC0003DMT400024646	Potato	golgi, peroxisome, plasma membrane	44.47	33.57
PGSC0003DMT400030125	Potato	plasma membrane	41.41	32.58
PGSC0003DMT400012668	Potato	plasma membrane	43.89	31.0
PGSC0003DMT400095504	Potato	plasma membrane	28.63	29.94
PGSC0003DMT400053633	Potato	endoplasmic reticulum, plasma membrane, vacuole	7.82	23.3

Protein Annotations

EnsemblPlants:PGSC0003DMT400068221	EnsemblPlantsGene:PGSC0003DMG400026523	EntrezGene:102590208	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Glyco_trans_2-like	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF17
PFAM:PF13632	PGSC:PGSC0003DMG400026523	RefSeq:XP_006349077.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix
UniParc:UPI0002958E3C	UniProt:M1CIM5	MapMan:21.2.3.1.1.1	:	:	:

Description

UPA15 [Source:PGSC_GENE;Acc:PGSC0003DMG400026523]

Coordinates

chr11:+:39715742..39723485

Molecular Weight (calculated)

60311.2 Da

IEP (calculated)

8.934

GRAVY (calculated)

0.177

Length

524 amino acids

Sequence
(BLAST)

001: MSTVQATAAD IAGQIGMMWE VLKAPLLVPL LKAAVYICIA MELMLFVERL YMGIVIVLVK IFMKKPDKRY KWIPMADDDL EIGSADFPKV LVQIPMFNEK
101: EVYKISIGAA CNLSWPSDRL VIQVLDDSTD PIVKDMVETE CLRWESKGLN ITYQIRETRG GYKAGALKEG LKHNYVKDCE YVVIFDADFR PEPDFLRRSI
201: PFLIHNPEIA LVQGRWRFVN SNECLLTRMQ EMSLDYHFTV EQEVGSSTHA FFGFNGTGGI WRIAAIEEAG GWKDRTTVED MDLAVRASLK GWKFVYLGDL
301: QVKSELPSTF KAFRFQQHRW SCGPANLFRK MVMEIVRNKR VNFWKKFYVI YSFFFVRKII AHMVTFFFFC VVLPLTLLVP EVEVPIWAAI YIPCIITTLN
401: SVGTPRSIHL LFYWILFENV MAYHRTKATF IGLFEAKRAN EWVVTEKLGD ALKNKDKSKP VKKARGPLFG DRILPQELGF AAFLFFCGLY DVLYGKRQYF
501: VYVFLQVITF TIAGFGYIGT IVPS

Best Arabidopsis Sequence Match ( AT5G22740.1 )
(BLAST)

001: MDGVSPKFVL PETFDGVRME ITGQLGMIWE LVKAPVIVPL LQLAVYICLL MSVMLLCERV YMGIVIVLVK LFWKKPDKRY KFEPIHDDEE LGSSNFPVVL
101: VQIPMFNERE VYKLSIGAAC GLSWPSDRLV IQVLDDSTDP TVKQMVEVEC QRWASKGINI RYQIRENRVG YKAGALKEGL KRSYVKHCEY VVIFDADFQP
201: EPDFLRRSIP FLMHNPNIAL VQARWRFVNS DECLLTRMQE MSLDYHFTVE QEVGSSTHAF FGFNGTAGIW RIAAINEAGG WKDRTTVEDM DLAVRASLRG
301: WKFLYLGDLQ VKSELPSTFR AFRFQQHRWS CGPANLFRKM VMEIVRNKKV RFWKKVYVIY SFFFVRKIIA HWVTFCFYCV VLPLTILVPE VKVPIWGSVY
401: IPSIITILNS VGTPRSIHLL FYWILFENVM SLHRTKATLI GLFEAGRANE WVVTAKLGSG QSAKGNTKGI KRFPRIFKLP DRLNTLELGF AAFLFVCGCY
501: DFVHGKNNYF IYLFLQTMSF FISGLGWIGT YVPS

Arabidopsis Description

CSLA2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUD8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.