Factsheet for Bra002426.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020212.1-P	Field mustard	plasma membrane	54.18	98.31
Bra006633.1-P	Field mustard	plasma membrane	51.39	97.65
CDX92340	Canola	plasma membrane	94.53	96.93
AT5G22740.1	Thale cress	plasma membrane	53.25	96.63
KRH30518	Soybean	endoplasmic reticulum	45.2	80.81
KRH25159	Soybean	endoplasmic reticulum	44.79	79.93
KRH22736	Soybean	plasma membrane	43.96	79.92
VIT_06s0061g01230.t01	Wine grape	plasma membrane	42.93	78.05
Solyc11g066820.1.1	Tomato	plasma membrane	41.38	76.53
PGSC0003DMT400068221	Potato	plasma membrane	41.28	76.34
PGSC0003DMT400018425	Potato	plasma membrane	41.69	75.8
Solyc06g074630.2.1	Tomato	plasma membrane	41.69	75.8
TraesCS6A01G169200.1	Wheat	plasma membrane	38.8	72.59
HORVU6Hr1G034630.10	Barley	plasma membrane	38.6	72.2
TraesCS6B01G197200.1	Wheat	plasma membrane	38.6	72.2
TraesCS6D01G158600.1	Wheat	plasma membrane	38.6	72.2
Os02t0192500-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	38.39	71.4
Bra009512.1-P	Field mustard	plasma membrane	39.01	71.05
Bra005779.1-P	Field mustard	plasma membrane	38.8	70.68
EES06436	Sorghum	plasma membrane	37.87	70.44
Zm00001d053696_P003	Maize	plasma membrane	37.77	64.44
Bra008638.1-P	Field mustard	plasma membrane	31.37	60.2
Bra006343.1-P	Field mustard	plasma membrane	31.17	59.92
Bra024603.1-P	Field mustard	plasma membrane	32.92	57.48
Bra023020.1-P	Field mustard	plasma membrane	31.79	56.2
Bra007207.1-P	Field mustard	plasma membrane	30.03	55.64
Bra012702.1-P	Field mustard	plasma membrane	28.38	54.46
Bra012416.1-P	Field mustard	plasma membrane	30.65	54.4
Bra017305.1-P	Field mustard	plasma membrane	30.86	46.57
Bra032705.1-P	Field mustard	plasma membrane	31.48	42.84
Bra025323.1-P	Field mustard	plasma membrane	23.32	33.48
Bra039061.1-P	Field mustard	plasma membrane	23.12	33.14
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	22.5	33.03
Bra000635.1-P	Field mustard	plasma membrane	22.81	31.94
Bra001246.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.7	31.47
Bra023993.1-P	Field mustard	plasma membrane	21.57	31.43
Bra011284.1-P	Field mustard	plasma membrane	22.6	22.55
Bra033039.1-P	Field mustard	plasma membrane	6.4	19.02

Protein Annotations

MapMan:21.2.3.1.1.1	Gene3D:3.80.10.10	Gene3D:3.90.550.10	EnsemblPlantsGene:Bra002426	EnsemblPlants:Bra002426.1	EnsemblPlants:Bra002426.1-P
InterPro:FBD	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Glyco_trans_2-like	InterPro:IPR029044
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_2	UniProt:M4CDZ5	InterPro:Nucleotide-diphossugar_trans	PFAM:PF07723
PFAM:PF08387	PFAM:PF13632	PANTHER:PTHR32044	PANTHER:PTHR32044:SF17	SMART:SM00579	SUPFAM:SSF52047
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000254449A	:	:	:

Description

AT5G22740 (E=7e-312) ATCSLA02, CSLA02, ATCSLA2 | ATCSLA02; mannan synthase/ transferase, transferring glycosyl groups

Coordinates

chrA10:+:9645993..9653142

Molecular Weight (calculated)

111179.0 Da

IEP (calculated)

7.251

GRAVY (calculated)

0.057

Length

969 amino acids

Sequence
(BLAST)

001: MDGVTPKFVL PETFDGVKME ITGQLGMIWE LVKAPVIVPL LQLAVDICLL MSLMLLCERV YMGIVIVLVK LFWKKPHKRY KFEPIQDDEE LGSSNFPVVL
101: VQIPMFNERE VYKLSIGAAS GLSWPSDRLV IQVLDDSTDP TVKQMVEMEC QRWASKGINI RYQIRENRVG YKAGALKEGL KRSYVKHCEY VVIFDADFQP
201: EPDFLRRSIP FLVHNPNIAL VQARWRFVNS DECLLTRMQE MSLDYHFTVE QEVGSSTHAF FGFNGTAGIW RIAAINEAGG WKDRTTVEDM DLAVRASLRG
301: WKFLYLGDLQ VKSELPSTFR AFRFQQHRWS CGPANLFRKM VMEIIRNKKV RFWKKVYVIY SFFFVRKVIA HWVTFCFYCV VLPLTILVPE VKVPIWGSVY
401: IPSIITVLNS VGTPRSIHLL FYWILFENVM SLHRTKATLI GLFEADRANE WVVTAKLGSG QSAKGNTEGL KKFPRIFKLP DRLNTLELGF AAFLFVCGCY
501: DYAHGKNNYF IYLFLQTMSF FISGLGWIGT YVPSVTMQTT CRANLAMNER GTIRRSGEDW ISFLPDPLLC QILSDLPTKN AVTTSLLDFS KESCLHSLNL
601: AFKRQDDGDP SLLASWIETA VLRKIQHLEV DCRMSFMSET TPLSLYLCET LVSLRLYFVA LPSFESLSLP NLKVMHMEEN LYADDEILEK LVSSCPVLES
701: LTVVRNVDET VKVLRVWSKT LNSLKLVLDS SKSWYNDDSN DWEVLIDAPR LNYLSLEDDQ SVSFVISNVA SSAKVEIDVS FNVNDIWDMD ESMERFSAVG
801: KMLNGLSSAR DMTISGTTLK IISHYMSFEP VPCFPNMIRL QTKLYMTDML PNFLESFPNL QSLVLKLKGV RYSDTMWFSF VPKCLQTSLE YVEMTRPNCG
901: AGIEMIRKLV KYLLENSVVL KKFTLRLECE GKEQESNVVK ELMRFRRCSS SCVINVVRLE DDVCIFQHP

Best Arabidopsis Sequence Match ( AT5G22740.1 )
(BLAST)

001: MDGVSPKFVL PETFDGVRME ITGQLGMIWE LVKAPVIVPL LQLAVYICLL MSVMLLCERV YMGIVIVLVK LFWKKPDKRY KFEPIHDDEE LGSSNFPVVL
101: VQIPMFNERE VYKLSIGAAC GLSWPSDRLV IQVLDDSTDP TVKQMVEVEC QRWASKGINI RYQIRENRVG YKAGALKEGL KRSYVKHCEY VVIFDADFQP
201: EPDFLRRSIP FLMHNPNIAL VQARWRFVNS DECLLTRMQE MSLDYHFTVE QEVGSSTHAF FGFNGTAGIW RIAAINEAGG WKDRTTVEDM DLAVRASLRG
301: WKFLYLGDLQ VKSELPSTFR AFRFQQHRWS CGPANLFRKM VMEIVRNKKV RFWKKVYVIY SFFFVRKIIA HWVTFCFYCV VLPLTILVPE VKVPIWGSVY
401: IPSIITILNS VGTPRSIHLL FYWILFENVM SLHRTKATLI GLFEAGRANE WVVTAKLGSG QSAKGNTKGI KRFPRIFKLP DRLNTLELGF AAFLFVCGCY
501: DFVHGKNNYF IYLFLQTMSF FISGLGWIGT YVPS

Arabidopsis Description

CSLA2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUD8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.