Factsheet for Bra006343.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 6
plasma membrane 7
endoplasmic reticulum 6
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78675	Canola	plasma membrane	100.0	100.0
Bra008638.1-P	Field mustard	plasma membrane	92.66	92.48
AT5G16190.4	Thale cress	plasma membrane	89.48	83.99
Bra012416.1-P	Field mustard	plasma membrane	79.96	73.81
Bra012702.1-P	Field mustard	plasma membrane	66.27	66.14
Bra005779.1-P	Field mustard	plasma membrane	65.28	61.84
Bra009512.1-P	Field mustard	plasma membrane	65.08	61.65
Bra024603.1-P	Field mustard	plasma membrane	67.46	61.26
Bra007207.1-P	Field mustard	plasma membrane	62.1	59.85
Bra032705.1-P	Field mustard	plasma membrane	80.16	56.74
Bra020212.1-P	Field mustard	plasma membrane	59.92	56.55
Bra006633.1-P	Field mustard	plasma membrane	56.75	56.08
Bra023020.1-P	Field mustard	plasma membrane	59.52	54.74
Bra017305.1-P	Field mustard	plasma membrane	61.71	48.44
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	41.67	31.82
Bra025323.1-P	Field mustard	plasma membrane	42.06	31.41
Bra039061.1-P	Field mustard	plasma membrane	42.06	31.36
Bra002426.1-P	Field mustard	plasma membrane	59.92	31.17
Bra000635.1-P	Field mustard	plasma membrane	42.06	30.64
Bra023993.1-P	Field mustard	plasma membrane	40.28	30.53
Bra001246.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.48	29.18
Bra011284.1-P	Field mustard	plasma membrane	42.06	21.83
Bra033039.1-P	Field mustard	plasma membrane	10.91	16.87

Protein Annotations

EnsemblPlants:Bra006343.1	EnsemblPlants:Bra006343.1-P	EnsemblPlantsGene:Bra006343	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21	PFAM:PF13641
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000253F5F2	UniProt:M4CQ54	MapMan:21.2.3.1.1.1	:

Description

AT4G13410 (E=4e-258) ATCSLA15, CSLA15 | ATCSLA15; cellulose synthase/ transferase, transferring glycosyl groups

Coordinates

chrA03:-:3102921..3105950

Molecular Weight (calculated)

58816.8 Da

IEP (calculated)

8.952

GRAVY (calculated)

0.215

Length

504 amino acids

Sequence
(BLAST)

001: METMWLRQAR SLLLVPLFKC LVAICLVISL LVFVESVYMN IVVIYVKLFK RKPEKIYKWE AMQEDIEVGN QNYPMVLVQI PMYNEREVFQ LSIGAACRLI
101: WPLDRVIIQV LDDSTDPTIM EMVSMECAKW ASKGINIKCE RRDNRNGYKA GALKQGMRHS YVKQCNYIAI FDADFQPEPD YLHRTVPFLI HNPELALVQA
201: RWKFVNANKC LMTRMQEMSL NYHFMAEQES GSTRHAFFGF NGTAGVWRLA GMEEAGGWKD RTTVEDMDLA VRVGLHGWKF VFVNDIEVKS ELPSQFKAFR
301: FQQHRWSCGP ANLFRKMTME IIHNKRVVIW KKLYVIYSFF FLRKILVHFF TFFFYCIVLP TSVFFYEVNI PTWSTIYVPF VITFFTAIAT PRSFYLVFFW
401: VLFENVMAMH RTKGTFIGLL EGGRVNEWVV TEKLGDALET KLLPQVKKPR NGILQRLNLK EMMVGIYILC CACYDFAFGS TLLYIYLFMQ ALAFIICGVG
501: FVGT

Best Arabidopsis Sequence Match ( AT5G16190.3 )
(BLAST)

001: MKTMWWRDMR SLLIVPMFKC LVAICLVISL LVFVESLYMN IVVIYVKLCK RKPEKIYKWE AMQEDLELGN QNFPMVLVQI PMYNEREVFK LSIGAACRLI
101: WPLDRLIVQV LDDSTDPTIM EMVSTECGKW ATKGINIKCE RRDNRNGYKA GALKQGMRHS YVKTCTYIAI FDADFQPEPD YLERTVPFLI HNPELALVQA
201: RWKFVNAKKC LMTRMQEMSL NYHFTAEQES GSTRHAFFGF NGTAGVWRLA AMEEAGGWKD RTTVEDMDLA VRVGLHGWKF VFVNDVSVKS ELPSQFKAFR
301: FQQHRWSCGP ANLFRKMTME IIRNKRVTIW KKLYVIYSFF FVRKIIVHFF TFFFYCFILP TSVFFPEVNI PTWSTVYFPF MITLFNAIAT PRSFYLVIFW
401: VLFENVMAMH RTKGTFIGLL EGGRVNEWVV TEKLGDALET KLLPQVRKPR NGFLERINSK EMMVGIYILC CASYNLVFGK TVLYIYLYMQ ALAFIIAGIG
501: FIGT

Arabidopsis Description

ATCSLA11cellulose synthase like A11 [Source:TAIR;Acc:AT5G16190]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.