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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69464 Canola cytosol, peroxisome, plasma membrane 75.42 91.42
Bra008638.1-P Field mustard plasma membrane 84.73 90.1
CDX78675 Canola plasma membrane 83.99 89.48
Bra006343.1-P Field mustard plasma membrane 83.99 89.48
CDX70677 Canola cytosol, peroxisome, plasma membrane 73.37 88.94
CDY26505 Canola plasma membrane 84.73 88.69
AT4G13410.1 Thale cress extracellular, plasma membrane 75.79 75.79
AT1G24070.1 Thale cress plasma membrane 75.23 73.19
AT4G16590.1 Thale cress endoplasmic reticulum, plasma membrane 63.69 65.77
AT1G23480.2 Thale cress plasma membrane 64.25 62.05
AT5G03760.1 Thale cress plasma membrane 59.96 60.41
AT5G22740.1 Thale cress plasma membrane 56.98 57.3
AT3G56000.1 Thale cress endoplasmic reticulum 56.24 56.45
AT2G35650.1 Thale cress plasma membrane 57.73 55.76
AT3G28180.1 Thale cress plasma membrane 40.78 32.54
AT4G31590.1 Thale cress plasma membrane 40.97 31.79
AT2G24630.1 Thale cress endoplasmic reticulum, peroxisome, plasma membrane 40.78 31.74
AT3G07330.1 Thale cress cytosol, peroxisome, plasma membrane 39.11 30.79
AT4G07960.1 Thale cress plasma membrane 40.04 30.76
Protein Annotations
MapMan:21.2.3.1.1.1Gene3D:3.90.550.10EntrezGene:831477UniProt:A0A1P8BCB4ProteinID:ANM69244.1ArrayExpress:AT5G16190
EnsemblPlantsGene:AT5G16190RefSeq:AT5G16190TAIR:AT5G16190RefSeq:AT5G16190-TAIR-GEnsemblPlants:AT5G16190.4Symbol:ATCSLA11
Unigene:At.31704GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:Glyco_trans_2-likeInterPro:IPR029044
RefSeq:NP_001330941.1InterPro:Nucleotide-diphossugar_transPFAM:PF13632PANTHER:PTHR32044PANTHER:PTHR32044:SF21SUPFAM:SSF53448
TMHMM:TMhelixUniParc:UPI0008488148SEG:seg:::
Description
ATCSLA11cellulose synthase like A11 [Source:TAIR;Acc:AT5G16190]
Coordinates
chr5:-:5283449..5286780
Molecular Weight (calculated)
62814.9 Da
IEP (calculated)
9.382
GRAVY (calculated)
0.222
Length
537 amino acids
Sequence
(BLAST)
001: MKTMWWRDMR SLLIVPMFKC LVAICLVISL LVFVESLYMN IVVIYVKLCK RKPEKIYKWE AMQEDLELGN QNFPMVLVQI PMYNEREVFK LSIGAACRLI
101: WPLDRLIVQV LDDSTDPTIM EMVSTECGKW ATKGINIKCE RRDNRNGYKA GALKQGMRHS YVKTCTYIAI FDADFQPEPD YLERTVPFLI HNPELALVQA
201: RWKFVNAKKC LMTRMQEMSL NYHFTAEQES GSTRHAFFGF NGTAGVWRLA AMEEAGGWKD RTTVEDMDLA VRVGLHGWKF VFVNDVSVKS ELPSQFKAFR
301: FQQHRWSCGP ANLFRKMTME IIRNKRVTIW KKLYVIYSFF FVRKIIVHFF TFFFYCFILP TSVFFPEVNI PTWSTVYFPF MITLFNAIAT PRLVLCSFIH
401: IIVVTSQIIV YNNEFIMKYI WYACRSFYLV IFWVLFENVM AMHRTKGTFI GLLEGGRVNE WVVTEKLGDA LETKLLPQVR KPRNGFLERI NSKEMMVGIY
501: ILCCASYNLV FGKTVLYIYL YMQALAFIIA GIGFIGT
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.