Factsheet for Bra008638.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 4
golgi 4
plasma membrane 5
endoplasmic reticulum 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69464	Canola	cytosol, peroxisome, plasma membrane	87.33	99.55
Bra006343.1-P	Field mustard	plasma membrane	92.48	92.66
AT5G16190.4	Thale cress	plasma membrane	90.1	84.73
Bra012416.1-P	Field mustard	plasma membrane	79.01	73.08
Bra012702.1-P	Field mustard	plasma membrane	66.53	66.53
Bra005779.1-P	Field mustard	plasma membrane	65.54	62.22
Bra009512.1-P	Field mustard	plasma membrane	65.15	61.84
Bra024603.1-P	Field mustard	plasma membrane	67.52	61.44
Bra007207.1-P	Field mustard	plasma membrane	62.38	60.23
Bra032705.1-P	Field mustard	plasma membrane	80.4	57.02
Bra020212.1-P	Field mustard	plasma membrane	60.2	56.93
Bra006633.1-P	Field mustard	plasma membrane	57.03	56.47
Bra023020.1-P	Field mustard	plasma membrane	60.59	55.84
Bra017305.1-P	Field mustard	plasma membrane	62.38	49.07
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	41.98	32.12
Bra039061.1-P	Field mustard	plasma membrane	42.77	31.95
Bra025323.1-P	Field mustard	plasma membrane	42.18	31.56
Bra002426.1-P	Field mustard	plasma membrane	60.2	31.37
Bra023993.1-P	Field mustard	plasma membrane	40.0	30.38
Bra000635.1-P	Field mustard	plasma membrane	41.39	30.2
Bra001246.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.4	29.18
Bra011284.1-P	Field mustard	plasma membrane	42.18	21.94
Bra033039.1-P	Field mustard	plasma membrane	11.29	17.48

Protein Annotations

EnsemblPlants:Bra008638.1	EnsemblPlants:Bra008638.1-P	EnsemblPlantsGene:Bra008638	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21	PFAM:PF13641
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002544A64	UniProt:M4CWP1	MapMan:21.2.3.1.1.1	:

Description

AT4G13410 (E=1e-252) ATCSLA15, CSLA15 | ATCSLA15; cellulose synthase/ transferase, transferring glycosyl groups

Coordinates

chrA10:+:13186779..13189607

Molecular Weight (calculated)

58791.6 Da

IEP (calculated)

9.035

GRAVY (calculated)

0.169

Length

505 amino acids

Sequence
(BLAST)

001: METMWWLRQT RSLLIVPVFK CLVAICLVIS LLVFVESVYM NIVVLYVKLL KRKPEKTYKW EAMQEDIEQG GQNFPMVLVQ IPMYNEREVF QLSIGAACRL
101: IWPLDRLIVQ VLDDSTDPTI MEMVSMECAQ WASKGINIKC ERRDNRNGYK AGALKQGMRH SYVKQCNYIA IFDADFQPEP DYLQRTVPFL IHNSELALVQ
201: ARWKFVNASK CLMTRMQEMS LNYHFMAEQE SGSTRHAFFG FNGTAGVWRL AAMEEAGGWK DRTTVEDMDL AVRVGLHGWK FVFVNDITVK SELPSQFKAF
301: RFQQHRWSCG PANLFRKMTM EIIHNKRVMI WKKLYVIYSF FFVRKIIVHF FTFFFYCVIL PTSVFFSEVK IPTWSTIYLP FMITLFNAIA TPRSFYLVVF
401: WVLFENVMAM HRTKGTFIGL LEGGRVNEWV VTEKLGDALE TKLLPQVKKP RNGILERVNT KEMMVGIYIL SCACYDFAYG NTLLYIYLSM QALAFIICGF
501: GFVGT

Best Arabidopsis Sequence Match ( AT5G16190.3 )
(BLAST)

001: MKTMWWRDMR SLLIVPMFKC LVAICLVISL LVFVESLYMN IVVIYVKLCK RKPEKIYKWE AMQEDLELGN QNFPMVLVQI PMYNEREVFK LSIGAACRLI
101: WPLDRLIVQV LDDSTDPTIM EMVSTECGKW ATKGINIKCE RRDNRNGYKA GALKQGMRHS YVKTCTYIAI FDADFQPEPD YLERTVPFLI HNPELALVQA
201: RWKFVNAKKC LMTRMQEMSL NYHFTAEQES GSTRHAFFGF NGTAGVWRLA AMEEAGGWKD RTTVEDMDLA VRVGLHGWKF VFVNDVSVKS ELPSQFKAFR
301: FQQHRWSCGP ANLFRKMTME IIRNKRVTIW KKLYVIYSFF FVRKIIVHFF TFFFYCFILP TSVFFPEVNI PTWSTVYFPF MITLFNAIAT PRSFYLVIFW
401: VLFENVMAMH RTKGTFIGLL EGGRVNEWVV TEKLGDALET KLLPQVRKPR NGFLERINSK EMMVGIYILC CASYNLVFGK TVLYIYLYMQ ALAFIIAGIG
501: FIGT

Arabidopsis Description

ATCSLA11cellulose synthase like A11 [Source:TAIR;Acc:AT5G16190]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.