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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • endoplasmic reticulum 2
  • golgi 2
  • extracellular 1
  • plasma membrane 3
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
MultiLoc:endoplasmic reticulum
Plant-mPloc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra023252.1-P
Bra035511.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G03760.1 Bra023252.1-P AT1G32230.1 19548978
AT5G03760.1 Bra035511.1-P AT1G32230.1 19548978
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY11268 Canola plasma membrane 99.44 99.44
Bra009512.1-P Field mustard plasma membrane 96.43 96.43
AT5G03760.1 Thale cress plasma membrane 94.55 94.37
Solyc09g009010.2.1 Tomato cytosol, peroxisome, plasma membrane 46.99 83.61
Solyc10g083670.1.1 Tomato plasma membrane 82.14 81.99
KRH67832 Soybean plasma membrane 81.95 81.8
KRG96119 Soybean plasma membrane 81.77 81.61
PGSC0003DMT400072644 Potato plasma membrane 81.58 81.43
GSMUA_Achr10P... Banana plasma membrane 79.32 80.23
VIT_08s0007g03990.t01 Wine grape cytosol, peroxisome, plasma membrane 81.39 80.19
PGSC0003DMT400007050 Potato mitochondrion 79.14 78.99
GSMUA_Achr2P20260_001 Banana plasma membrane 78.76 78.61
KRH32645 Soybean plasma membrane 75.38 78.47
KRH20021 Soybean plasma membrane 75.19 78.28
GSMUA_Achr10P... Banana plasma membrane 78.38 78.24
GSMUA_Achr6P13400_001 Banana plasma membrane 79.7 78.23
Bra006633.1-P Field mustard plasma membrane 68.8 71.76
Bra020212.1-P Field mustard plasma membrane 71.24 70.97
GSMUA_Achr5P15920_001 Banana plasma membrane 74.06 65.67
Bra008638.1-P Field mustard plasma membrane 62.22 65.54
Bra006343.1-P Field mustard plasma membrane 61.84 65.28
Bra024603.1-P Field mustard plasma membrane 65.6 62.88
Bra023020.1-P Field mustard plasma membrane 63.91 62.04
Bra007207.1-P Field mustard plasma membrane 59.77 60.8
Bra012416.1-P Field mustard plasma membrane 60.9 59.34
Bra012702.1-P Field mustard plasma membrane 54.51 57.43
Bra017305.1-P Field mustard plasma membrane 62.97 52.18
Bra032705.1-P Field mustard plasma membrane 60.34 45.08
Bra002426.1-P Field mustard plasma membrane 70.68 38.8
Bra007838.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 44.55 35.91
Bra023993.1-P Field mustard plasma membrane 42.48 33.98
Bra039061.1-P Field mustard plasma membrane 42.67 33.58
Bra025323.1-P Field mustard plasma membrane 42.11 33.19
Bra000635.1-P Field mustard plasma membrane 42.48 32.66
Bra001246.1-P Field mustard cytosol, peroxisome, plasma membrane 41.92 31.9
Bra011284.1-P Field mustard plasma membrane 44.74 24.51
Bra033039.1-P Field mustard plasma membrane 11.28 18.4
Protein Annotations
EnsemblPlants:Bra005779.1EnsemblPlants:Bra005779.1-PEnsemblPlantsGene:Bra005779Gene3D:3.90.550.10GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF10PFAM:PF13641
SEG:segSUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI000253FB88UniProt:M4CNJ1MapMan:21.2.3.1.1.1
Description
AT5G03760 (E=8e-296) ATCSLA09, CSLA09, ATCSLA9, CSLA9, RAT4 | ATCSLA09; mannan synthase/ transferase, transferring glycosyl groups
Coordinates
chrA03:-:569538..573781
Molecular Weight (calculated)
60985.0 Da
IEP (calculated)
9.289
GRAVY (calculated)
0.124
Length
532 amino acids
Sequence
(BLAST)
001: MELGDSAAVI PDSFMGYRDD ITMQMTMILD QIRAPLIVPV LRLAVYICLT MSVMLFVERV YMGIVISLVK LFGRKPEKRF KWEPMKDDIE HGNSVYPMVL
101: VQIPMYNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEKEC SRWASKGINI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EPDYLWRTVP FLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALSEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKIVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSIITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDL KAKSATKTLK KLRFRFGDRI HVLELGVGMY LFFVGCYDVF
501: FGKNHYYLYL FAQAIAFFIA GLGQIGTIVP NS
Best Arabidopsis Sequence Match ( AT5G03760.1 )
(BLAST)
001: MELGDTTSVI PDSFMGYRDD ITMQMSMVLD QIRAPLIVPA LRLGVYICLT MSVMLFVERV YMGIVISLVK LFGRKPDKRF KYEPIKDDIE LGNSAYPMVL
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH
Arabidopsis Description
CSLA9RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.