Factsheet for Bra011284.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plastid 1
plasma membrane 6
golgi 4
extracellular 3
endoplasmic reticulum 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra006619.1-P
Bra020182.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G31590.1	Bra002403.1-P	AT5G22290.1	21798944
AT4G31590.1	Bra006619.1-P	AT5G22290.1	21798944
AT4G31590.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023993.1-P	Field mustard	plasma membrane	66.43	96.99
AT4G31590.1	Thale cress	plasma membrane	68.69	96.39
CDY60854	Canola	plasma membrane	84.66	93.94
CDX68766	Canola	plasma membrane	74.56	93.42
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	59.11	86.97
VIT_04s0069g00780.t01	Wine grape	plasma membrane	58.19	81.41
KRH61950	Soybean	plasma membrane	57.26	80.23
VIT_09s0018g01950.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	56.95	79.8
KRH52609	Soybean	plasma membrane	56.85	79.65
KRH16165	Soybean	plasma membrane	55.2	77.34
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	38.1	77.24
KRH04930	Soybean	plasma membrane	54.69	76.62
PGSC0003DMT400024646	Potato	golgi, peroxisome, plasma membrane	54.69	76.51
Solyc08g006310.2.1	Tomato	golgi, peroxisome, plasma membrane	54.48	76.22
Bra000635.1-P	Field mustard	plasma membrane	48.09	67.49
Bra039061.1-P	Field mustard	plasma membrane	46.76	67.16
Bra025323.1-P	Field mustard	plasma membrane	46.65	67.11
HORVU3Hr1G000340.2	Barley	plasma membrane	44.08	66.25
TraesCSU01G038900.1	Wheat	cytosol, peroxisome, plasma membrane	49.43	64.0
TraesCS3B01G000600.1	Wheat	cytosol, peroxisome, plasma membrane	49.43	63.91
KRH57821	Soybean	plasma membrane	15.76	63.49
Zm00001d049336_P001	Maize	plasma membrane	49.85	63.35
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	49.33	63.28
TraesCS3D01G010500.1	Wheat	cytosol, peroxisome, plasma membrane	49.33	63.19
KXG24822	Sorghum	peroxisome	49.12	62.76
Bra001246.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.15	59.94
Bra033039.1-P	Field mustard	plasma membrane	19.05	56.75
Bra005779.1-P	Field mustard	plasma membrane	24.51	44.74
Bra009512.1-P	Field mustard	plasma membrane	24.41	44.55
Bra008638.1-P	Field mustard	plasma membrane	21.94	42.18
Bra006343.1-P	Field mustard	plasma membrane	21.83	42.06
Bra023020.1-P	Field mustard	plasma membrane	23.27	41.24
Bra020212.1-P	Field mustard	plasma membrane	22.66	41.2
Bra012416.1-P	Field mustard	plasma membrane	22.97	40.84
Bra006633.1-P	Field mustard	plasma membrane	21.42	40.78
Bra024603.1-P	Field mustard	plasma membrane	22.86	40.0
Bra007207.1-P	Field mustard	plasma membrane	21.52	39.96
Bra012702.1-P	Field mustard	plasma membrane	20.7	39.8
Bra017305.1-P	Field mustard	plasma membrane	23.07	34.89
Bra032705.1-P	Field mustard	plasma membrane	22.66	30.9
Bra002426.1-P	Field mustard	plasma membrane	22.55	22.6

Protein Annotations

EnsemblPlants:Bra011284.1	EnsemblPlants:Bra011284.1-P	EnsemblPlantsGene:Bra011284	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	ncoils:Coil	PANTHER:PTHR32044	PANTHER:PTHR32044:SF7
PFAM:PF13641	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000254680D
UniProt:M4D480	MapMan:21.2.1.1.1	MapMan:24.2.1.1.8	:	:	:

Description

AT4G31590 (E=0.0) ATCSLC05, CSLC05, ATCSLC5 | ATCSLC5 (CELLULOSE-SYNTHASE LIKE C5); cellulose synthase/ transferase, transferring glycosyl groups

Coordinates

chrA01:+:2923939..2930679

Molecular Weight (calculated)

109927.0 Da

IEP (calculated)

8.367

GRAVY (calculated)

0.371

Length

971 amino acids

Sequence
(BLAST)

001: MAMVFIDKAV IIQYPHSMTL LTLQLLLCLF TVADEWDTLD PEESIYPLLK SFLPVSIFYN ANVAFALASL KGVNIPMYIA IKRLTPLAVL IAGYLFGKGK
101: PTTQVLLTAA GCVVAALGDF SFDLLGYGLA LTRGVPTMFP SLGSLASVLL TICYNKDFFT PRCLQTMYLV LVEKSGAQDG VSSIEIMFYN SFLSLPFLSF
201: LIIATSEFPN SISLLLAKCS YLPFLVILVL SLVMRIVLNF TMFLCTIVNS AITTTIVGVL KGVGSTTLGF VLLGGVEVHM APRLDFSDWW AKDTRKGTPV
301: VVKMENPNYS VVEIQGPDSA FRPVEKSRGK NAKQVTWVLL LKAHRAVGCL TWFATVFWSL LGAIKKRLSF THPLGSERLG RDRWLFTAIK LFLALSLLIL
401: GFEIIAYFRG WHYFESPSLH IPTSTLEIQS LLHLVYVGWL WLRADYIAPP IKALSKFCIV LFLIQSVDRL ILCLGCFWIK YKKIKPRFDE EPFRNDDAEG
501: CGYVYPMVLV QIPMCNEREV YEQSISAVCQ LDWTKDRILV QVLDDSNDES IQQLIKAEVA KWSQKGVNII YRHRLVRTGY KAGNLKSAMS CDYVEAYEFV
601: AIFDADFQPN PDFLKLTVPH FKDNPELGLV QARWTFVNKD ENLLTRLQNI NLCFHFEVEQ QVSGVFLNFF GFNGTAGVWR IKALEESGGW LERTTVEDMD
701: IAVRAHLHGW KFIYLNDVKV LCEVPESYEA YKKQQHRWHS GPMQLFRLCL GAILTSKIAI WKKANLILLF FLLRKLILPF YSFTLFCIIL PLTMFVPEAE
801: LPVWVICYIP VFMSFLNLLP SPKSFPFIVP YLLFENTMSV TKFNAMVSGL FQLGSSYEWI VTKKAGRSSE SDLLSITEKE TPSKRSQLLR GVSDSELLEL
901: NQLEEQKQAV AKKPVKKINK IYHKELALAF LLLTAAVRSL LAAQGVHFYF LMFQGVTFLL VGLDLIGEQM S

Best Arabidopsis Sequence Match ( AT4G31590.1 )
(BLAST)

001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS

Arabidopsis Description

CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.