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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d024178_P002 Maize cytosol, peroxisome, plasma membrane 93.68 94.06
Zm00001d049336_P001 Maize plasma membrane 94.34 93.85
Os08t0253800-01 Rice cytosol, peroxisome, plasma membrane 55.92 88.73
TraesCS3B01G000600.1 Wheat cytosol, peroxisome, plasma membrane 81.18 82.16
TraesCSU01G038900.1 Wheat cytosol, peroxisome, plasma membrane 80.92 82.0
TraesCS3D01G010500.1 Wheat cytosol, peroxisome, plasma membrane 81.58 81.79
HORVU3Hr1G000340.2 Barley plasma membrane 69.21 81.42
VIT_09s0018g01950.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 64.87 71.14
KRH52609 Soybean plasma membrane 64.87 71.14
KRH61950 Soybean plasma membrane 64.74 71.0
VIT_04s0069g00780.t01 Wine grape plasma membrane 64.34 70.46
CDX76802 Canola plasma membrane 61.18 70.45
Bra007838.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 61.18 70.45
CDX72314 Canola plasma membrane 62.89 69.88
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 62.63 69.59
AT2G24630.1 Thale cress endoplasmic reticulum, peroxisome, plasma membrane 63.16 69.57
AT4G31590.1 Thale cress plasma membrane 63.03 69.22
Bra023993.1-P Field mustard plasma membrane 60.39 69.02
CDY13445 Canola plasma membrane 62.37 69.0
PGSC0003DMT400024646 Potato golgi, peroxisome, plasma membrane 62.76 68.73
Solyc08g006310.2.1 Tomato golgi, peroxisome, plasma membrane 62.5 68.44
KXG35666 Sorghum mitochondrion, plasma membrane 62.76 68.14
KRH16165 Soybean plasma membrane 61.18 67.1
KRH04930 Soybean plasma membrane 60.79 66.67
EER90820 Sorghum plasma membrane 58.68 64.45
CDY57881 Canola extracellular 10.53 64.0
KXG22328 Sorghum plasma membrane 58.55 63.85
KXG33450 Sorghum mitochondrion, peroxisome, plasma membrane 57.76 63.72
KXG34323 Sorghum plasma membrane 55.79 62.17
CDX68766 Canola plasma membrane 63.03 61.81
CDY60854 Canola plasma membrane 63.03 54.74
Bra011284.1-P Field mustard plasma membrane 62.76 49.12
KRH57821 Soybean plasma membrane 14.34 45.23
OQU76114 Sorghum plasma membrane 27.24 42.24
EES06436 Sorghum plasma membrane 28.68 41.84
KXG20409 Sorghum plasma membrane, plastid 29.47 41.79
EER97593 Sorghum plasma membrane 29.61 39.27
OQU89056 Sorghum mitochondrion, plasma membrane 28.03 38.73
KXG30765 Sorghum plasma membrane 27.5 38.42
EER95427 Sorghum plasma membrane 27.5 38.21
KXG25219 Sorghum plasma membrane 27.5 36.1
OQU91819 Sorghum plasma membrane 28.42 34.95
Protein Annotations
EnsemblPlants:KXG24822EnsemblPlantsGene:SORBI_3007G090600Gene3D:3.90.550.10GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF7PFAM:PF13641ProteinID:KXG24822
ProteinID:KXG24822.1SEG:segSUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0003C6E10CUniProt:A0A1B6PGL0
MapMan:21.2.1.1.1:::::
Description
hypothetical protein
Coordinates
chr7:-:14230916..14235307
Molecular Weight (calculated)
86580.4 Da
IEP (calculated)
8.464
GRAVY (calculated)
-0.080
Length
760 amino acids
Sequence
(BLAST)
001: MAPPSSWWGS DQEQHGTPVV VKMDNPYSLV EIDGPGMPPS DKARGKNAKQ FTWVLLLRAH RAVGCVAWLA GGFWGVLGAV NRRVRRSRDA DEEPDAEASG
101: RGRVMLRFLR AFLLLSLAML ALETVAHLKG WQFPQHLPGN LQELEEQLQH LPEHLRHLPE NLRQLPDHLR VPERQEIQGW LHRAYVAWLE FRVDYIAWAI
201: QKLSCFCILL FMVQSVDRIV QCLACFWIKI RGIKPRIPPP ASAGKKKKPR RKSADVENGE ADDDADGYFP MVLIQMPMCN EKEVYETSIS HVCQMDWPRD
301: RLLIQVLDDS DDEVCQMLIR AEVTKWSQRG VNIIYRHRLS RTGYKAGNLK SAMACDYVKD YEFVAIFDAD FQPNPDFLKL TVPHFKEDPE LGLVQARWSF
401: VNKDENLLTR LQNINLCFHF EVEQQVNGVY LNFFGFNGTA GVWRIKALED SGGWMERTTV EDMDIAVRAH LNGWKFIFLN DVKVLCELPE SYQAYRKQQH
501: RWHSGPMQLF RLCIPAIIRS KIPFWKKANL VMLFFLLRKL VLPFYSFTLF CVILPLTMFV PEAELPIWVI CYIPVLMSLL NIMPAPKSFP FIIPYLLFEN
601: TMSVTKFNAM VSGLFQLGSS YEWIVTKKAG RTSSANDILA MAEADAHAPL PAKLARRVSE GGLEEWSRLR EQEAAEWANK EDAAASLAAA AAAAPATPKK
701: SSKAKKPNRI FKKELALACL LLTAATRSLL SKQGLHFYFL LFQGVTFLAV GLDLIGEQVS
Best Arabidopsis Sequence Match ( AT4G31590.1 )
(BLAST)
001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS
Arabidopsis Description
CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.