CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 4
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH22653
KRH26664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G31590.1	KRH22653	AT5G22290.1	21798944
AT4G31590.1	KRH26664	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16165	Soybean	plasma membrane	94.81	94.81
KRH57821	Soybean	plasma membrane	31.6	90.87
KRH61950	Soybean	plasma membrane	86.0	86.0
KRH52609	Soybean	plasma membrane	85.57	85.57
VIT_04s0069g00780.t01	Wine grape	plasma membrane	80.81	80.69
VIT_09s0018g01950.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	77.2	77.2
AT4G31590.1	Thale cress	plasma membrane	76.77	76.88
CDX72314	Canola	plasma membrane	75.47	76.46
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	52.81	76.41
Bra023993.1-P	Field mustard	plasma membrane	73.3	76.39
CDY13445	Canola	plasma membrane	75.47	76.13
KRH47014	Soybean	cytosol, golgi, peroxisome, plastid	75.04	75.14
Solyc08g006310.2.1	Tomato	golgi, peroxisome, plasma membrane	75.04	74.93
PGSC0003DMT400024646	Potato	golgi, peroxisome, plasma membrane	75.04	74.93
AT2G24630.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	74.6	74.93
CDX76802	Canola	plasma membrane	71.28	74.85
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	71.14	74.7
CDY34762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	73.59	74.56
KRH44638	Soybean	cytosol	74.89	74.46
CDX68766	Canola	plasma membrane	76.77	68.65
KRH18597	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	65.37	68.64
KRG93391	Soybean	plasma membrane	65.22	68.48
CDY57881	Canola	extracellular	12.27	68.0
HORVU3Hr1G000340.2	Barley	plasma membrane	60.03	64.4
KRH15467	Soybean	plasma membrane	64.94	64.38
KRH52142	Soybean	plasma membrane	65.22	64.02
KRH61452	Soybean	plasma membrane	65.37	63.98
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	67.24	61.56
Zm00001d049336_P001	Maize	plasma membrane	67.68	61.39
TraesCS3B01G000600.1	Wheat	cytosol, peroxisome, plasma membrane	65.95	60.85
CDY60854	Canola	plasma membrane	76.77	60.8
TraesCSU01G038900.1	Wheat	cytosol, peroxisome, plasma membrane	65.8	60.8
KXG24822	Sorghum	peroxisome	66.67	60.79
TraesCS3D01G010500.1	Wheat	cytosol, peroxisome, plasma membrane	65.8	60.16
KRH07420	Soybean	plasma membrane	60.32	59.89
KRH66156	Soybean	endoplasmic reticulum	60.32	59.12
Bra011284.1-P	Field mustard	plasma membrane	76.62	54.69
KRH55858	Soybean	cytosol	7.36	44.74
KRG96119	Soybean	plasma membrane	33.77	43.9
KRH67832	Soybean	plasma membrane	33.62	43.71
KRH20021	Soybean	plasma membrane	32.03	43.44
KRH32645	Soybean	plasma membrane	31.89	43.25
KRG92056	Soybean	plasma membrane	32.47	42.53
KRH34719	Soybean	plasma membrane	32.32	42.34
KRH22736	Soybean	plasma membrane	32.32	42.03
KRH25159	Soybean	endoplasmic reticulum	32.18	41.07
KRH30518	Soybean	endoplasmic reticulum	32.03	40.96
KRH67729	Soybean	plasma membrane	30.3	39.85
KRG96022	Soybean	plasma membrane	30.01	39.39

Protein Annotations

EMBL:ACUP02010638	EnsemblPlants:KRH04930	EnsemblPlantsGene:GLYMA_17G196700	EntrezGene:100790165	Gene3D:3.90.550.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF7
PFAM:PF13641	ProteinID:KRH04930	ProteinID:KRH04930.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix
UniParc:UPI000233F38E	UniProt:I1MWE2	MapMan:21.2.1.1.1	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:30779213..30783330

Molecular Weight (calculated)

79489.6 Da

IEP (calculated)

8.856

GRAVY (calculated)

0.116

Length

693 amino acids

Sequence
(BLAST)

001: MAPSFDFANR WMKETQKGTP VVVTMENPTF SVVEINGADA AFMPVEKTRG KNAKQVTWFL FLKAYHAIGC VTWFATVLWS FMGAIGKRLI HREGLALESE
101: KLEKGKILFR VIKVFVVSSL VVMVFEVVAY LQGWHFGNPS LHIPRPVDLE GLMYLVYVAW LTFRGEYIAP PMQALSKFCI VLFLIQSVDR MMLCFGCFWI
201: KYKRIKPKID GDALKVDDIE GSACNHPMVL VQIPMCNERE VYEQSISAVC QINWPRDCLL IQVLDDSDDE SIQWLIKTEV TKWSQKGINI IYRHRLVRTG
301: YKAGNLKSAM SCDYVKDYEF VAIFDADFQP NPDFLKQTVP YFKDNPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGAFLNF FGFNGTAGVW
401: RIKTLEESGG WLERTTVEDM DIAVRAHLNG WKFIFVNDVK VLCEVPESYE AYRKQQHRWH SGPMQLFRLC LPAILRSKIS PWKKGNLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA KLPLWVICYI PVFMSFLNIL PAPKSFPFLV PYLLFENTMS VTKFNAMISG LFQLGSSYEW IVTKKAGRSS ESDLVAAAER
601: EAKSIIEQQK IHRGASDRVL VESNQSKEHK ETSGKPVKKA NKIYKKELTL AFLLLTASVK SLLSAQGVHF YYLLFQGVTF LLVGLDLIGQ QMS

Best Arabidopsis Sequence Match ( AT4G31590.1 )
(BLAST)

001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS

Arabidopsis Description

CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.