CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 2
golgi 2
extracellular 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34719	Soybean	plasma membrane	98.68	98.68
VIT_13s0074g00500.t01	Wine grape	plasma membrane	72.59	85.52
KRG96119	Soybean	plasma membrane	79.58	78.99
KRH67832	Soybean	plasma membrane	79.4	78.8
KRH20021	Soybean	plasma membrane	72.59	75.15
KRH32645	Soybean	plasma membrane	72.59	75.15
KRH22736	Soybean	plasma membrane	70.89	70.36
KRH30518	Soybean	endoplasmic reticulum	69.94	68.27
KRH25159	Soybean	endoplasmic reticulum	69.75	67.96
KRH67729	Soybean	plasma membrane	63.71	63.95
KRG96022	Soybean	plasma membrane	63.14	63.26
KRH55858	Soybean	cytosol	11.91	55.26
KRH18597	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	43.1	34.55
KRG93391	Soybean	plasma membrane	42.91	34.39
KRH07420	Soybean	plasma membrane	44.61	33.81
KRH61950	Soybean	plasma membrane	44.05	33.62
KRH52609	Soybean	plasma membrane	43.86	33.48
KRH44638	Soybean	cytosol	43.86	33.29
KRH47014	Soybean	cytosol, golgi, peroxisome, plastid	43.29	33.09
KRH15467	Soybean	plasma membrane	43.67	33.05
KRH66156	Soybean	endoplasmic reticulum	44.05	32.96
KRH16165	Soybean	plasma membrane	43.1	32.9
KRH04930	Soybean	plasma membrane	42.53	32.47
KRH52142	Soybean	plasma membrane	43.1	32.29
KRH61452	Soybean	plasma membrane	43.1	32.2
KRH57821	Soybean	plasma membrane	6.43	14.11

Protein Annotations

EMBL:ACUP02012727	EnsemblPlants:KRG92056	EnsemblPlantsGene:GLYMA_20G188600	EntrezGene:100797453	Gene3D:3.90.550.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF10
PFAM:PF13641	ProteinID:KRG92056	ProteinID:KRG92056.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix
UniParc:UPI000233DADA	UniProt:I1NHP1	MapMan:21.2.3.1.1.1	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:42722910..42729010

Molecular Weight (calculated)

60625.6 Da

IEP (calculated)

9.346

GRAVY (calculated)

0.124

Length

529 amino acids

Sequence
(BLAST)

001: MDRLSSAATF ESMHYGSASQ MGLIWQQARA PLVVPLMKLL VVLCLAMSLM LFVERVYMGI VIIFVKLFRY KPEKKYKWEP LRDDLEFGNS AYPMVLVQIP
101: MYNEKEVYQL SIGAACGLSW PSDRVIIQVL DDSTDPIIKN MVEVECQRWA SKGVNIKYEI RENRNGYKAG ALKEGMKHSY VNLCDYVAIF DADFQPEPNF
201: LWRTIPFLAY NPEVALVQAR WKFVNADECL MTRMQEMSLD YHFLVEQEVG SSTYAFFGFN GTAGVWRISA LNEAGGWKDR TTVEDMDLAV RAGLKGGKFV
301: YLSDLKVKSE LPSTFKAYRY QQHRWSCGPA NLFKKMAMEI MRNKKVSMWK KLYVIYSFFF VRKIVAHVVT FVFYCVIMPA TVLVPEVEVP KWGAVYIPSI
401: ITLLNAVGTP RSIHLLVFWI LFENVMSMHR TKATLTGLLE AGRVNEWVVT EKLGDALKTK SGGKAARKPR IRIGERLHFL ELLVGAYLFF CACYDLKYGK
501: NHYFIYLFLQ SMAFFVAGVG YVGTFVPNS

Best Arabidopsis Sequence Match ( AT5G03760.1 )
(BLAST)

001: MELGDTTSVI PDSFMGYRDD ITMQMSMVLD QIRAPLIVPA LRLGVYICLT MSVMLFVERV YMGIVISLVK LFGRKPDKRF KYEPIKDDIE LGNSAYPMVL
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH

Arabidopsis Description

CSLA9RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.