Factsheet for VIT_13s0074g00500.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, golgi, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34719	Soybean	plasma membrane	86.19	73.16
VIT_08s0007g03990.t01	Wine grape	cytosol, peroxisome, plasma membrane	87.53	72.78
KRG92056	Soybean	plasma membrane	85.52	72.59
VIT_08s0040g01340.t01	Wine grape	extracellular, plasma membrane	71.49	66.88
VIT_06s0061g01230.t01	Wine grape	plasma membrane	75.72	63.79
VIT_14s0066g01730.t01	Wine grape	plasma membrane	47.88	32.38
VIT_09s0018g01950.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	47.66	30.88
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	46.99	30.19
VIT_04s0069g00780.t01	Wine grape	plasma membrane	46.33	29.97
VIT_00s0580g00010.t01	Wine grape	plasma membrane, plastid	45.88	27.36

Protein Annotations

EntrezGene:100255773	wikigene:100255773	MapMan:21.2.3.1.1.1	Gene3D:3.90.550.10	EMBL:AM485911	ProteinID:CAN62185
ProteinID:CAN62185.1	ProteinID:CBI40224	ProteinID:CBI40224.3	UniProt:D7UBV9	EMBL:FN596753	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR029044	EntrezGene:LOC100255773	wikigene:LOC100255773	InterPro:Nucleotide-diphossugar_trans
PFAM:PF13641	PANTHER:PTHR32044	PANTHER:PTHR32044:SF10	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0001BE5331
ArrayExpress:VIT_13s0074g00500	EnsemblPlantsGene:VIT_13s0074g00500	EnsemblPlants:VIT_13s0074g00500.t01	unigene:Vvi.25923	RefSeq:XP_002269110	RefSeq:XP_002269110.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr13:-:8342804..8347044

Molecular Weight (calculated)

51463.7 Da

IEP (calculated)

8.910

GRAVY (calculated)

0.032

Length

449 amino acids

Sequence
(BLAST)

001: MKDDVELGNS AYPMVLVQIP MYNEKEVYQL SIGAACGLSW PSERIIIQVL DDSTDPTIKD LVEMECQRWA SKGINIKYEI RGNRHGYKAG ALKEGMKHSY
101: VKQCDYVAIF DADFQPEPDF LWRTIPFLVH NPEIGLVQAR WKFVNSDECL MTRMQEMSLD YHFTVEQEVG SSSHAFFGFN GTAGVWRISA LNEAGGWKDR
201: TTVEDMDLAV RASLKGWKFV YVGALKVKNE LPSTFKAYRY QQHRWSCGPA NLFKKMAIEI ARNKKVNLWK KVYVIYSFFF VRKIVAHIVT FLFYCVVFPA
301: TVFFPEVEVP MWGAVYIPST ITLLNAVGTP RSLHLLVFWI LFENVMSLHR TKATFMGLLE VGRVNEWVVT EKLGDALKMK SSTKTSKKPR IRIGERMHLL
401: ELGVGAYLFF CGCYDVTYGK NGFFIYLFFQ SMAFFIAGFG YVGTFVPNS

Best Arabidopsis Sequence Match ( AT5G03760.1 )
(BLAST)

001: MELGDTTSVI PDSFMGYRDD ITMQMSMVLD QIRAPLIVPA LRLGVYICLT MSVMLFVERV YMGIVISLVK LFGRKPDKRF KYEPIKDDIE LGNSAYPMVL
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH

Arabidopsis Description

CSLA9RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.