Factsheet for VIT_06s0061g01230.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g074630.2.1	Tomato	plasma membrane	81.24	81.24
PGSC0003DMT400018425	Potato	plasma membrane	80.86	80.86
Bra006633.1-P	Field mustard	plasma membrane	76.17	79.61
CDX71011	Canola	plasma membrane	76.17	79.61
CDX88785	Canola	plasma membrane	76.17	79.61
AT5G22740.1	Thale cress	plasma membrane	79.36	79.21
CDY35710	Canola	plasma membrane	75.61	78.86
KRH22736	Soybean	plasma membrane	78.8	78.8
CDY09164	Canola	plasma membrane	75.23	78.63
CDY26949	Canola	plasma membrane	75.05	78.43
Bra020212.1-P	Field mustard	plasma membrane	78.24	78.09
Solyc11g066820.1.1	Tomato	plasma membrane	76.74	78.05
PGSC0003DMT400068221	Potato	plasma membrane	76.55	77.86
KRH30518	Soybean	endoplasmic reticulum	78.24	76.94
KRH25159	Soybean	endoplasmic reticulum	77.67	76.24
VIT_13s0074g00500.t01	Wine grape	plasma membrane	63.79	75.72
VIT_08s0007g03990.t01	Wine grape	cytosol, peroxisome, plasma membrane	75.05	74.07
Os02t0192500-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	70.54	72.17
EES06436	Sorghum	plasma membrane	69.04	70.63
TraesCS6B01G197200.1	Wheat	plasma membrane	68.11	70.08
HORVU6Hr1G034630.10	Barley	plasma membrane	67.92	69.88
TraesCS6A01G169200.1	Wheat	plasma membrane	67.92	69.88
TraesCS6D01G158600.1	Wheat	plasma membrane	67.92	69.88
VIT_08s0040g01340.t01	Wine grape	extracellular, plasma membrane	59.29	65.83
Zm00001d053696_P003	Maize	plasma membrane	69.04	64.79
Bra002426.1-P	Field mustard	plasma membrane	78.05	42.93
CDX92340	Canola	plasma membrane	75.23	42.43
VIT_14s0066g01730.t01	Wine grape	plasma membrane	44.09	35.39
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	44.47	33.91
VIT_09s0018g01950.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	43.53	33.48
VIT_04s0069g00780.t01	Wine grape	plasma membrane	42.78	32.85
VIT_00s0580g00010.t01	Wine grape	plasma membrane, plastid	42.78	30.28

Protein Annotations

EntrezGene:100251616	wikigene:100251616	MapMan:21.2.3.1.1.1	Gene3D:3.90.550.10	EMBL:AM436416	ProteinID:CAN82595
ProteinID:CAN82595.1	ProteinID:CCB44190	ProteinID:CCB44190.1	UniProt:F6GW55	EMBL:FN594957	GO:GO:0000003
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009791
GO:GO:0009987	GO:GO:0010192	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0047259
GO:GO:0048359	GO:GO:0051753	GO:GO:0097502	InterPro:Glyco_trans_2-like	InterPro:IPR029044	EntrezGene:LOC100251616
wikigene:LOC100251616	InterPro:Nucleotide-diphossugar_trans	PFAM:PF13632	PANTHER:PTHR32044	PANTHER:PTHR32044:SF17	SUPFAM:SSF53448
TIGR:TC52468	TIGR:TC70833	TMHMM:TMhelix	UniParc:UPI00015C9904	ArrayExpress:VIT_06s0061g01230	EnsemblPlantsGene:VIT_06s0061g01230
EnsemblPlants:VIT_06s0061g01230.t01	unigene:Vvi.2006	RefSeq:XP_002269677	RefSeq:XP_002269677.1	SEG:seg	:

Description

No Description!

Coordinates

chr6:+:19031074..19036458

Molecular Weight (calculated)

61393.5 Da

IEP (calculated)

9.372

GRAVY (calculated)

0.160

Length

533 amino acids

Sequence
(BLAST)

001: MAEISAKTLI PETFQGTRLD IAGQIGLVWE LVKAPLIVPL LRVAVYICLT MSLMLFVERL YMGIVIILVK IFWKKPDKRY KWEPLREDLE SGNSNFPHVV
101: VQIPMYNEKE VYKLSIGAAC GLSWPADRLV IQVLDDSTDP AIKNLVETEC QRWAAKGINI RYQIRENRVG YKAGALREGL KRSYVKHCEY VAIFDADFQP
201: EPDYLKRAIP FLVYNSDIAL VQGRWRFVNA DECLMTRMQE MSLDYHFTVE QEVGSATHAF FGFNGTAGVW RIAAINEAGG WKDRTTVEDM DLAVRASLKG
301: WKFVYLGDLQ VKSELPSTFK AFRFQQHRWS CGPANLFRKM VMEIVRNKKV RFWKKVYVIY SFFLVRKIVA HMVTFCLYCV VLPLTILIPE VEIPIWGIVY
401: IPSIITTLNA VGTPRSIHLL FYWILFENVM SFHRTKATLI GLLEAGRANE WVVTEKLGDT LKNKANTKAA AKRPRFKIGD RINTMELGFS AFLFFCACYD
501: FLYGKYYFYV YLFLQTITYF IVGIGYVGTI VPS

Best Arabidopsis Sequence Match ( AT5G22740.1 )
(BLAST)

001: MDGVSPKFVL PETFDGVRME ITGQLGMIWE LVKAPVIVPL LQLAVYICLL MSVMLLCERV YMGIVIVLVK LFWKKPDKRY KFEPIHDDEE LGSSNFPVVL
101: VQIPMFNERE VYKLSIGAAC GLSWPSDRLV IQVLDDSTDP TVKQMVEVEC QRWASKGINI RYQIRENRVG YKAGALKEGL KRSYVKHCEY VVIFDADFQP
201: EPDFLRRSIP FLMHNPNIAL VQARWRFVNS DECLLTRMQE MSLDYHFTVE QEVGSSTHAF FGFNGTAGIW RIAAINEAGG WKDRTTVEDM DLAVRASLRG
301: WKFLYLGDLQ VKSELPSTFR AFRFQQHRWS CGPANLFRKM VMEIVRNKKV RFWKKVYVIY SFFFVRKIIA HWVTFCFYCV VLPLTILVPE VKVPIWGSVY
401: IPSIITILNS VGTPRSIHLL FYWILFENVM SLHRTKATLI GLFEAGRANE WVVTAKLGSG QSAKGNTKGI KRFPRIFKLP DRLNTLELGF AAFLFVCGCY
501: DFVHGKNNYF IYLFLQTMSF FISGLGWIGT YVPS

Arabidopsis Description

CSLA2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUD8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.