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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006633.1-P Field mustard plasma membrane 99.8 99.8
CDX71011 Canola plasma membrane 99.41 99.41
CDY26949 Canola plasma membrane 98.04 98.04
CDY09164 Canola plasma membrane 97.45 97.45
CDY35710 Canola plasma membrane 97.45 97.26
AT5G22740.1 Thale cress plasma membrane 98.04 93.63
KRH30518 Soybean endoplasmic reticulum 83.33 78.41
KRH25159 Soybean endoplasmic reticulum 82.55 77.53
KRH22736 Soybean plasma membrane 80.98 77.49
VIT_06s0061g01230.t01 Wine grape plasma membrane 79.61 76.17
Solyc11g066820.1.1 Tomato plasma membrane 75.49 73.47
PGSC0003DMT400068221 Potato plasma membrane 75.49 73.47
Solyc06g074630.2.1 Tomato plasma membrane 76.27 72.98
PGSC0003DMT400018425 Potato plasma membrane 76.27 72.98
CDY10358 Canola plasma membrane 72.55 69.55
TraesCS6A01G169200.1 Wheat plasma membrane 70.59 69.5
CDX70286 Canola plasma membrane 72.35 69.36
CDY11268 Canola plasma membrane 72.16 69.17
TraesCS6D01G158600.1 Wheat plasma membrane 70.2 69.11
HORVU6Hr1G034630.10 Barley plasma membrane 70.2 69.11
TraesCS6B01G197200.1 Wheat plasma membrane 70.2 69.11
Os02t0192500-01 Rice cytosol, endoplasmic reticulum, plasma membrane 70.2 68.71
EES06436 Sorghum plasma membrane 69.02 67.56
CDY47369 Canola plasma membrane 36.86 62.67
Zm00001d053696_P003 Maize plasma membrane 68.63 61.62
CDY09672 Canola golgi 41.57 60.23
CDX69464 Canola cytosol, peroxisome, plasma membrane 51.76 59.59
CDX70677 Canola cytosol, peroxisome, plasma membrane 50.78 58.47
CDX80885 Canola plasma membrane 59.41 57.71
CDX78675 Canola plasma membrane 56.27 56.94
CDY26505 Canola plasma membrane 56.47 56.14
CDY44151 Canola plasma membrane 59.8 54.95
CDY04707 Canola plasma membrane 59.22 54.41
CDY01129 Canola plasma membrane 57.06 54.09
CDX79614 Canola plasma membrane 57.65 53.36
CDX72181 Canola plasma membrane 54.71 53.35
CDY54604 Canola plasma membrane 54.71 53.24
CDX92340 Canola plasma membrane 98.04 52.91
CDY32098 Canola plasma membrane 56.27 52.85
CDY68733 Canola plasma membrane 28.04 52.57
CDY32110 Canola mitochondrion 45.1 52.27
CDY40295 Canola plasma membrane 55.88 52.2
CDY47368 Canola endoplasmic reticulum, extracellular 5.88 51.72
CDX90506 Canola plasma membrane 54.71 50.45
CDY40448 Canola plasma membrane 56.67 48.82
CDY32100 Canola cytosol 1.57 47.06
CDY04011 Canola cytosol, peroxisome, plasma membrane 38.24 42.67
CDY00138 Canola cytosol, peroxisome, plasma membrane 37.25 41.58
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 40.39 36.33
CDY57881 Canola extracellular 8.04 32.8
CDX86448 Canola plasma membrane 41.96 32.57
CDX85189 Canola plasma membrane 41.96 32.57
CDY20029 Canola plasma membrane 41.18 31.91
CDX84607 Canola mitochondrion 7.45 31.67
CDX76802 Canola plasma membrane 40.98 31.67
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 41.18 30.7
CDX72314 Canola plasma membrane 40.98 30.56
CDY13445 Canola plasma membrane 40.98 30.42
CDX83148 Canola plasma membrane 40.78 30.06
CDY08003 Canola cytosol, peroxisome, plasma membrane 40.59 29.78
CDX74051 Canola cytosol, peroxisome, plasma membrane 40.39 29.47
CDX68766 Canola plasma membrane 41.18 27.1
CDX75177 Canola cytosol 14.12 24.74
CDY60854 Canola plasma membrane 41.18 24.0
CDY47235 Canola plasma membrane 9.8 15.34
Protein Annotations
EnsemblPlants:CDX88785EnsemblPlantsGene:GSBRNA2T00148846001Gene3D:3.90.550.10GO:A0A078DHU8InterPro:IPR029044InterPro:Nucleotide-diphossugar_trans
PANTHER:PTHR32044PANTHER:PTHR32044:SF17PFAM:PF13641ProteinID:CDX88785ProteinID:CDX88785.1SUPFAM:SSF53448
TMHMM:TMhelixUniParc:UPI0004EDB89AMapMan:21.2.3.1.1.1:::
Description
BnaA03g08640D
Coordinates
chrLK031856:+:926804..931767
Molecular Weight (calculated)
59047.8 Da
IEP (calculated)
9.476
GRAVY (calculated)
0.172
Length
510 amino acids
Sequence
(BLAST)
001: MDGVTPKFVL PETFDGVRME ITGQLGMIWE LVKAPVIVPL LQLAVYICLL MSVMLLCERV YMGIVIVLVK LFWKKPDKRY KFEPIQDDEE LGSSNFPVVL
101: VQIPMFNERE VYKLSIGAAS GLSWPSDRLV IQVLDDSTDP TVKQMVEMEC QRWASKGINI RYQIRENRVG YKAGALKEGL KRSYVKHCEY VVIFDADFQP
201: EPDFLRRSIP FLVHNPKIAL VQARWRFVNS DECLLTRMQE MSLDYHFTVE QEVGSATHAF FGFNGTAGIW RIAAINEAGG WKDRTTVEDM DLAVRASLRG
301: WKFLYLGDLQ VKSELPSTFR AFRFQQHRWS CGPANLFRKM VMEIVRNKKV RFWKKVYVIY SFFFVRKVIA HWVTFCFYCV VLPLTILVPE VKVPIWGSVY
401: IPSIITILNS VGTPRSIHLL FYWILFENVM SLHRTKATLI GNTKGLKKFP RIFKLPDRLN TLELGFAAFL FVCGCYDFVH GKNNYFIYLF LQTMSFFISG
501: LGWIGTYVPS
Best Arabidopsis Sequence Match ( AT5G22740.1 )
(BLAST)
001: MDGVSPKFVL PETFDGVRME ITGQLGMIWE LVKAPVIVPL LQLAVYICLL MSVMLLCERV YMGIVIVLVK LFWKKPDKRY KFEPIHDDEE LGSSNFPVVL
101: VQIPMFNERE VYKLSIGAAC GLSWPSDRLV IQVLDDSTDP TVKQMVEVEC QRWASKGINI RYQIRENRVG YKAGALKEGL KRSYVKHCEY VVIFDADFQP
201: EPDFLRRSIP FLMHNPNIAL VQARWRFVNS DECLLTRMQE MSLDYHFTVE QEVGSSTHAF FGFNGTAGIW RIAAINEAGG WKDRTTVEDM DLAVRASLRG
301: WKFLYLGDLQ VKSELPSTFR AFRFQQHRWS CGPANLFRKM VMEIVRNKKV RFWKKVYVIY SFFFVRKIIA HWVTFCFYCV VLPLTILVPE VKVPIWGSVY
401: IPSIITILNS VGTPRSIHLL FYWILFENVM SLHRTKATLI GLFEAGRANE WVVTAKLGSG QSAKGNTKGI KRFPRIFKLP DRLNTLELGF AAFLFVCGCY
501: DFVHGKNNYF IYLFLQTMSF FISGLGWIGT YVPS
Arabidopsis Description
CSLA2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUD8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.