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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
MultiLoc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007207.1-P Field mustard plasma membrane 99.43 99.62
CDX72181 Canola plasma membrane 98.47 98.66
AT3G56000.1 Thale cress endoplasmic reticulum 87.6 85.79
CDX69464 Canola cytosol, peroxisome, plasma membrane 54.77 64.79
CDX70677 Canola cytosol, peroxisome, plasma membrane 54.2 64.11
CDY44151 Canola plasma membrane 67.75 63.96
CDY04707 Canola plasma membrane 67.56 63.78
CDX78675 Canola plasma membrane 59.73 62.1
CDY47369 Canola plasma membrane 35.31 61.67
CDY26505 Canola plasma membrane 60.11 61.4
CDY68733 Canola plasma membrane 31.68 61.03
CDY10358 Canola plasma membrane 60.88 59.96
CDX70286 Canola plasma membrane 60.88 59.96
CDY11268 Canola plasma membrane 60.69 59.77
CDY09672 Canola golgi 38.74 57.67
CDY32110 Canola mitochondrion 48.28 57.5
CDY01129 Canola plasma membrane 58.59 57.06
CDY40295 Canola plasma membrane 58.59 56.23
CDY32098 Canola plasma membrane 57.82 55.8
CDY35710 Canola plasma membrane 53.82 55.19
CDY09164 Canola plasma membrane 53.44 54.9
CDX88785 Canola plasma membrane 53.24 54.71
CDY26949 Canola plasma membrane 53.05 54.51
CDX71011 Canola plasma membrane 53.05 54.51
CDX79614 Canola plasma membrane 57.25 54.45
CDX90506 Canola plasma membrane 57.25 54.25
CDY47368 Canola endoplasmic reticulum, extracellular 5.92 53.45
CDY40448 Canola plasma membrane 58.59 51.86
CDX80885 Canola plasma membrane 51.34 51.24
CDY04011 Canola cytosol, peroxisome, plasma membrane 36.83 42.23
CDY00138 Canola cytosol, peroxisome, plasma membrane 36.64 42.01
CDY32100 Canola cytosol 1.34 41.18
CDX84607 Canola mitochondrion 9.35 40.83
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 40.08 37.04
CDY20029 Canola plasma membrane 40.08 31.91
CDX76802 Canola plasma membrane 40.08 31.82
CDX86448 Canola plasma membrane 39.69 31.66
CDX85189 Canola plasma membrane 39.69 31.66
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 40.46 30.99
CDY08003 Canola cytosol, peroxisome, plasma membrane 40.65 30.65
CDX72314 Canola plasma membrane 39.89 30.56
CDX83148 Canola plasma membrane 40.27 30.49
CDY13445 Canola plasma membrane 39.89 30.42
CDY57881 Canola extracellular 7.25 30.4
CDX74051 Canola cytosol, peroxisome, plasma membrane 40.46 30.33
CDX92340 Canola plasma membrane 53.24 29.52
CDX68766 Canola plasma membrane 40.08 27.1
CDX75177 Canola cytosol 13.74 24.74
CDY60854 Canola plasma membrane 40.08 24.0
CDY47235 Canola plasma membrane 10.31 16.56
Protein Annotations
EnsemblPlants:CDY54604EnsemblPlantsGene:GSBRNA2T00014343001Gene3D:3.90.550.10GO:A0A078ITX5GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:Glyco_trans_2-likeInterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF21
PFAM:PF13632ProteinID:CDY54604ProteinID:CDY54604.1SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EE4978
UniProt:A0A078ITX5MapMan:21.2.3.1.1.1::::
Description
BnaA05g28600DBnaA05g28600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITX5]
Coordinates
chrLK033334:-:20547..22726
Molecular Weight (calculated)
60230.5 Da
IEP (calculated)
7.468
GRAVY (calculated)
0.198
Length
524 amino acids
Sequence
(BLAST)
001: MATSSDGLFA DMNFLGVIGY VLEQTRFIFL VPILNVLVNL CQVISLLLFI DASYMAIVVA IVKLRGRTPE KVLRWESFKT DDVELAPSSN HPMVLIQIPI
101: YNEKEVCQLS IGAVCKLSWP LDRMIVQVLD DSTDPHSKEL VRLECKKWAS EGINIKSEVR DSRNGYKAGA LTAGMKHSYV EGCEFVVIFD ADFQPESDFL
201: ERTVPFLAHN SEIALVQAGW KYVNADECCM TRIQEMSLNY HFAVEQKSGS SMHGFFGFNG TAGVWRISAL NEAGGWQDRT IVEDMDLAVR AYLNGWKFVF
301: VDNIKVSNEL PSSFRAYRYQ QHRWSCGPAN LFKKMAMEII KKENVSLWKK AYLIYNFFFV RKIVVHIFTF VFYCLILPAT VIFPEIEVPK WTTIYIPATI
401: TILNAIATPK SFYLILYWIL FENVMAMHRS KGTLIGLLET SRVKEWVVTQ KLGEYNTLRE NLITNHYSFP ERLRWREIMV GMYLFICGYY DFVFGKTYLY
501: VYLFLQSTAF FIVGVGYIGM SVPS
Best Arabidopsis Sequence Match ( AT3G56000.1 )
(BLAST)
001: MATLSDGLFD DMSVLGVIGY VLEQTRFIFL VPILKRLVNL CQVVSVLLFV DAAYMAIVVA IVKLLGRTPQ KVLKWESFKS DDIELAPSSN HPMVLIQIPI
101: FNEKEVCQLS IGAACKLSWP LDRMIIQVLD DSTEEESQKL VRLECKKWES EGITIKSEVR GGFREGFKAG ALTAGMKHSY VDEYKCEFVV IFDADFQPEP
201: DFLERTVPFL VHNPEIALVQ AGWKYGNADE CCMTRIQEMS LNYHFAVEQK SGSSILGFFG FNGTAGVWRI KALNEAEGWK DRTIVEDMDL AVRAYLRGSK
301: FVYVDDVKVK NELPSSFQAY RFQQHRWSCG PANLFKKIAM EIIKNQNVSL WKKVYLIYNF FFLRKIVVHI FTFVFYCVIL PATVIFPEIE VPKWTTIYIP
401: ATITILNAIA TPKSFYLILY WILFENVMAM HRSIGTLIGL LETSRVKEWI VTQKLGESNN LRENLIFPDH YSFPERLRWR EIMVGMYLFI CGYYDFVFGR
501: TYLYVYLFLQ SIAFFVVGVG YVGMPVPSTP VQTSE
Arabidopsis Description
CSLA14Probable mannan synthase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q84W06]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.