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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY40448 Canola plasma membrane 97.79 89.7
CDY32110 Canola mitochondrion 71.64 88.41
CDX79614 Canola plasma membrane 86.0 84.75
AT2G35650.1 Thale cress plasma membrane 85.27 83.27
CDX84607 Canola mitochondrion 16.21 73.33
CDY10358 Canola plasma membrane 62.06 63.35
CDX69464 Canola cytosol, peroxisome, plasma membrane 51.57 63.21
CDX70286 Canola plasma membrane 61.88 63.16
CDY11268 Canola plasma membrane 61.69 62.97
CDX78675 Canola plasma membrane 57.27 61.71
CDY47369 Canola plasma membrane 34.07 61.67
CDX70677 Canola cytosol, peroxisome, plasma membrane 50.28 61.63
CDY26505 Canola plasma membrane 57.83 61.21
CDY68733 Canola plasma membrane 30.02 59.93
CDY09672 Canola golgi 37.94 58.52
CDY54604 Canola plasma membrane 55.8 57.82
CDX72181 Canola plasma membrane 55.62 57.74
CDY40295 Canola plasma membrane 58.01 57.69
CDY44151 Canola plasma membrane 58.01 56.76
CDY35710 Canola plasma membrane 53.22 56.56
CDY09164 Canola plasma membrane 53.04 56.47
CDY04707 Canola plasma membrane 57.64 56.4
CDY01129 Canola plasma membrane 55.8 56.32
CDX88785 Canola plasma membrane 52.85 56.27
CDY26949 Canola plasma membrane 52.67 56.08
CDX71011 Canola plasma membrane 52.49 55.88
CDX80885 Canola plasma membrane 52.49 54.29
CDX90506 Canola plasma membrane 54.14 53.16
CDY04011 Canola cytosol, peroxisome, plasma membrane 37.38 44.42
CDY00138 Canola cytosol, peroxisome, plasma membrane 37.2 44.2
CDY47368 Canola endoplasmic reticulum, extracellular 4.6 43.1
CDY32100 Canola cytosol 1.29 41.18
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 39.78 38.1
CDY57881 Canola extracellular 8.1 35.2
CDX76802 Canola plasma membrane 41.07 33.79
CDY20029 Canola plasma membrane 40.88 33.74
CDX85189 Canola plasma membrane 40.52 33.49
CDX86448 Canola plasma membrane 40.52 33.49
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 40.88 32.46
CDX72314 Canola plasma membrane 40.52 32.16
CDY13445 Canola plasma membrane 40.33 31.88
CDX83148 Canola plasma membrane 39.96 31.36
CDY08003 Canola cytosol, peroxisome, plasma membrane 39.96 31.22
CDX74051 Canola cytosol, peroxisome, plasma membrane 39.96 31.04
CDX92340 Canola plasma membrane 52.67 30.26
CDX68766 Canola plasma membrane 40.52 28.39
CDY60854 Canola plasma membrane 40.52 25.14
CDX75177 Canola cytosol 12.52 23.37
CDY47235 Canola plasma membrane 10.68 17.79
Protein Annotations
EnsemblPlants:CDY32098EnsemblPlantsGene:GSBRNA2T00051453001Gene3D:3.90.550.10GO:A0A078H5K9GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF21PFAM:PF13641
ProteinID:CDY32098ProteinID:CDY32098.1SEG:segSUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EDF6B0
UniProt:A0A078H5K9MapMan:21.2.3.1.1.1::::
Description
BnaC04g44680DBnaC04g44680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5K9]
Coordinates
chrLK032287:-:290012..297071
Molecular Weight (calculated)
62641.7 Da
IEP (calculated)
8.402
GRAVY (calculated)
0.186
Length
543 amino acids
Sequence
(BLAST)
001: MSPLTSFHRI AHDTFSSFLL SLDGSFLLGS EDVVNTRISL WWEQARAIVV VPFFKFLVAL CLIMSVMYFV EVMYMGIVVA YVKLFKRKPE KVYKWEAMEN
101: DAECGSKSFP MVLVQIPMYN EKEVCEQSIA AACRISWPSN CIIIQVLDDS TDPASKELVR RECERWSRQG VNITFEIRDN RNGYKAGALR EGMKHSYVKQ
201: CDYIAIFDAD FQPEPDFLHR TVPFLIHNPK LALVQGRWEF VNADQCIMTR LQEMSLSYHF TVEQQVGSST FAFFGFNGTA GVWRITALNE SGGWNDQTTV
301: EDMDVAVRAT LRGWKLLYID DLKVKSELPC SFNALRSQQH RWTCGPANLF RKMAGQIIRS ENVSLWKKLY MLYSFFFMRK VVAHILTFCF YCVILPATVL
401: FPEVTVPKWA AFYLPALITL FIAIGKPRSV YLLVLWVLFE NAMSMLRTKA LVMGFFETGR VQEWVVTEKL GDGLKTKLIG QVSNEHQVRF RDRVHFLELL
501: LGVYLLFCGC YDIIYGKNRL YLYVYLLMQS TAFFVVGFGF VGK
Best Arabidopsis Sequence Match ( AT2G35650.1 )
(BLAST)
001: MSPLPIFHRL PHATFSSFLL SLSQAGSSKT SVAFLNAFKS EDIIARIGLW WQLIRAVVVV PVFKFLVLLC LVMSVMFFVE VMYMGIVVLY VKLFKRKPEK
101: FYKWEAMEDD VECGSASYPM VLVQIPMYNE KEVCEQSIAA ACKISWPSNR IIIQVLDDST DPASKELVKK ECDRWSKEGV NITFEIRDNR NGYKAGALRE
201: GMRHSYVKQC DYVAIFDADF QPDPDFLHRT VPFLIHNPKL ALVQGRWEFV NAGQCMMTRL QEMSLSYHFT IEQQVGSSTF AFFGFNGTAG VWRISALNES
301: GGWNDQTTVE DMDLAVRATL RGWKFLYIDD LKVKSELPCS FKALRSQQHR WTCGPANLLR KMAGQIIRSE NVSLWKKWYM LYSFFFMRKI VAHILTFCFY
401: CVILPATVLF PEVTVPKWAA FYLPSLITLL IAIGRLRSIH LLAFWVLFEN AMSLLRAKAL VMGLFETGRV QEWVVTEKLG DTLKTKLIPQ VPNVRFRERV
501: HLLELLVGAY LLFCGIYDIV YGKNTLYVYL LFQSVAFFVV GFGFVGKYVP ASSYLA
Arabidopsis Description
CSLA7Probable mannan synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQN8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.