Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31590.1 | CDX70995 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDX88803 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDX92368 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDY09128 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDY35676 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G31590.1 | Thale cress | plasma membrane | 76.23 | 96.39 |
| CDY13445 | Canola | plasma membrane | 75.66 | 96.36 |
| CDX72314 | Canola | plasma membrane | 75.2 | 96.2 |
| CDX68766 | Canola | plasma membrane | 82.63 | 93.29 |
| CDX76802 | Canola | plasma membrane | 65.6 | 86.97 |
| CDY34762 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 67.77 | 86.7 |
| Bra011284.1-P | Field mustard | plasma membrane | 93.94 | 84.66 |
| VIT_04s0069g00780.t01 | Wine grape | plasma membrane | 64.69 | 81.56 |
| KRH61950 | Soybean | plasma membrane | 63.77 | 80.52 |
| VIT_09s0018g01950.t01 | Wine grape | endoplasmic reticulum, peroxisome, plasma membrane | 63.43 | 80.09 |
| CDY57881 | Canola | extracellular | 11.43 | 80.0 |
| KRH52609 | Soybean | plasma membrane | 63.31 | 79.94 |
| CDY04011 | Canola | cytosol, peroxisome, plasma membrane | 41.49 | 79.43 |
| CDY00138 | Canola | cytosol, peroxisome, plasma membrane | 41.14 | 78.77 |
| KRH16165 | Soybean | plasma membrane | 61.37 | 77.49 |
| Os08t0253800-01 | Rice | cytosol, peroxisome, plasma membrane | 42.4 | 77.45 |
| PGSC0003DMT400024646 | Potato | golgi, peroxisome, plasma membrane | 60.91 | 76.8 |
| KRH04930 | Soybean | plasma membrane | 60.8 | 76.77 |
| Solyc08g006310.2.1 | Tomato | golgi, peroxisome, plasma membrane | 60.69 | 76.51 |
| CDY34018 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 46.74 | 72.13 |
| CDX85189 | Canola | plasma membrane | 52.23 | 69.56 |
| CDX86448 | Canola | plasma membrane | 52.11 | 69.41 |
| CDY20029 | Canola | plasma membrane | 51.54 | 68.54 |
| CDX83148 | Canola | plasma membrane | 53.49 | 67.63 |
| HORVU3Hr1G000340.2 | Barley | plasma membrane | 49.14 | 66.56 |
| TraesCSU01G038900.1 | Wheat | cytosol, peroxisome, plasma membrane | 55.09 | 64.27 |
| TraesCS3B01G000600.1 | Wheat | cytosol, peroxisome, plasma membrane | 55.09 | 64.18 |
| Zm00001d049336_P001 | Maize | plasma membrane | 55.54 | 63.61 |
| Zm00001d024178_P002 | Maize | cytosol, peroxisome, plasma membrane | 54.97 | 63.54 |
| KRH57821 | Soybean | plasma membrane | 17.49 | 63.49 |
| TraesCS3D01G010500.1 | Wheat | cytosol, peroxisome, plasma membrane | 54.97 | 63.46 |
| KXG24822 | Sorghum | peroxisome | 54.74 | 63.03 |
| CDY08003 | Canola | cytosol, peroxisome, plasma membrane | 48.23 | 60.72 |
| CDX74051 | Canola | cytosol, peroxisome, plasma membrane | 48.0 | 60.09 |
| CDY47235 | Canola | plasma membrane | 21.14 | 56.75 |
| CDX75177 | Canola | cytosol | 17.03 | 51.2 |
| CDY32100 | Canola | cytosol | 0.91 | 47.06 |
| CDY09672 | Canola | golgi | 18.17 | 45.17 |
| CDX69464 | Canola | cytosol, peroxisome, plasma membrane | 22.86 | 45.15 |
| CDX70677 | Canola | cytosol, peroxisome, plasma membrane | 22.86 | 45.15 |
| CDY10358 | Canola | plasma membrane | 27.2 | 44.74 |
| CDY11268 | Canola | plasma membrane | 27.2 | 44.74 |
| CDX70286 | Canola | plasma membrane | 27.09 | 44.55 |
| CDY47369 | Canola | plasma membrane | 15.2 | 44.33 |
| CDX78675 | Canola | plasma membrane | 24.34 | 42.26 |
| CDY26505 | Canola | plasma membrane | 24.57 | 41.91 |
| CDY35710 | Canola | plasma membrane | 24.23 | 41.49 |
| CDY40295 | Canola | plasma membrane | 25.83 | 41.39 |
| CDY47368 | Canola | endoplasmic reticulum, extracellular | 2.74 | 41.38 |
| CDY01129 | Canola | plasma membrane | 25.37 | 41.26 |
| CDX88785 | Canola | plasma membrane | 24.0 | 41.18 |
| CDY09164 | Canola | plasma membrane | 24.0 | 41.18 |
| CDY32110 | Canola | mitochondrion | 20.69 | 41.14 |
| CDX79614 | Canola | plasma membrane | 25.83 | 41.02 |
| CDY26949 | Canola | plasma membrane | 23.89 | 40.98 |
| CDX71011 | Canola | plasma membrane | 23.89 | 40.98 |
| CDX72181 | Canola | plasma membrane | 24.23 | 40.54 |
| CDY32098 | Canola | plasma membrane | 25.14 | 40.52 |
| CDY04707 | Canola | plasma membrane | 25.49 | 40.18 |
| CDY44151 | Canola | plasma membrane | 25.49 | 40.18 |
| CDY54604 | Canola | plasma membrane | 24.0 | 40.08 |
| CDX90506 | Canola | plasma membrane | 24.23 | 38.34 |
| CDY68733 | Canola | plasma membrane | 11.77 | 37.87 |
| CDY40448 | Canola | plasma membrane | 25.49 | 37.67 |
| CDX80885 | Canola | plasma membrane | 22.17 | 36.95 |
| CDX84607 | Canola | mitochondrion | 3.66 | 26.67 |
| CDX92340 | Canola | plasma membrane | 24.11 | 22.33 |
Protein Annotations
| EnsemblPlants:CDY60854 | EnsemblPlantsGene:GSBRNA2T00030131001 | Gene3D:3.90.550.10 | GO:A0A078J7X7 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | ncoils:Coil | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF7 |
| PFAM:PF13641 | ProteinID:CDY60854 | ProteinID:CDY60854.1 | SEG:seg | SUPFAM:SSF53448 | TMHMM:TMhelix |
| UniParc:UPI0004EE5999 | UniProt:A0A078J7X7 | MapMan:21.2.1.1.1 | MapMan:24.2.1.1.8 | : | : |
Description
BnaA01g34810DBnaA01g34810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7X7]
Coordinates
chrLK033921:-:24662..32193
Molecular Weight (calculated)
99229.9 Da
IEP (calculated)
8.123
GRAVY (calculated)
0.319
Length
875 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVQIGSFGP NFLKWTRDGF SIEDSVVLSV LLTAAGCVIA ALGDFSFDLF GYGLALTSVF FQTMYLLLVE KSGAQDGLSS IEIMFYNSFL SLPFLSFLII
101: ATGEFPNYVL LLLAKCSYLP FLVILVLSLV MGIVLNFTMF LCTIVNSALT TLSLSFGYGA GGRHANPALG FVLLGGVEVH ALNMAPRLDF SDWWAKDTRK
201: GTPVVVKMEN PNYSVVEIQG PDSAFRPVEK SRGKNAKQVT WVLLLKAHRA VGCLTWFATV FWSLLGAIKK RLSFTHPLGS ERLGRDRWLF TAIKLFLALS
301: LLILAFEIIA YFRGWHYFES PSLHIPTSTL EIQSLLHLVY VGWLSLRADY IAPPIKALSK FCIVLFLIQS VDRLILCLGC FWIKYKKIKP RFDEEPFRND
401: DAEGCGYVYP MVLVQIPMCN EREVYEQSIS AVCQLDWPKD RILVQVLDDS NDESIQQLIK AEVAKWSQKG VNIIYRHRLV RTGYKAGNLK SAMSCDYVEA
501: YEFVAIFDAD FQPNPDFLKL TVPHFKDNPE LGLVQARWTF VNKDENLLTR LQNINLCFHF EVEQQVSGVF LNFFGFNGTA GVWRIKALEE SGGWLERTTV
601: EDMDIAVRAH LHGWKFIYLN DVKVLCEVPE SYEAYKKQQH RWHSGPMQLF RLCLGAILTS KIAIWKKANL ILLFFLLRKL ILPFYSFTLF CIILPLTMFV
701: PEAELPVWVI CYIPVFMSFL NLLPSPKSFP FIVPYLLFEN TMSVTKFNAM VSGLFQLGSS YEWIVTKKAG RSSESDLLSI TEKETPSKRS QLLRGVSDSE
801: LLELNQLEEQ KQAVAKKPVK KINKIYHKEL ALAFLLLTAA VRSLLAAQGV HFYFLMFQGV TFLLVGLDLI GEQMS
101: ATGEFPNYVL LLLAKCSYLP FLVILVLSLV MGIVLNFTMF LCTIVNSALT TLSLSFGYGA GGRHANPALG FVLLGGVEVH ALNMAPRLDF SDWWAKDTRK
201: GTPVVVKMEN PNYSVVEIQG PDSAFRPVEK SRGKNAKQVT WVLLLKAHRA VGCLTWFATV FWSLLGAIKK RLSFTHPLGS ERLGRDRWLF TAIKLFLALS
301: LLILAFEIIA YFRGWHYFES PSLHIPTSTL EIQSLLHLVY VGWLSLRADY IAPPIKALSK FCIVLFLIQS VDRLILCLGC FWIKYKKIKP RFDEEPFRND
401: DAEGCGYVYP MVLVQIPMCN EREVYEQSIS AVCQLDWPKD RILVQVLDDS NDESIQQLIK AEVAKWSQKG VNIIYRHRLV RTGYKAGNLK SAMSCDYVEA
501: YEFVAIFDAD FQPNPDFLKL TVPHFKDNPE LGLVQARWTF VNKDENLLTR LQNINLCFHF EVEQQVSGVF LNFFGFNGTA GVWRIKALEE SGGWLERTTV
601: EDMDIAVRAH LHGWKFIYLN DVKVLCEVPE SYEAYKKQQH RWHSGPMQLF RLCLGAILTS KIAIWKKANL ILLFFLLRKL ILPFYSFTLF CIILPLTMFV
701: PEAELPVWVI CYIPVFMSFL NLLPSPKSFP FIVPYLLFEN TMSVTKFNAM VSGLFQLGSS YEWIVTKKAG RSSESDLLSI TEKETPSKRS QLLRGVSDSE
801: LLELNQLEEQ KQAVAKKPVK KINKIYHKEL ALAFLLLTAA VRSLLAAQGV HFYFLMFQGV TFLLVGLDLI GEQMS
001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS
Arabidopsis Description
CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.