Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47368 | Canola | endoplasmic reticulum, extracellular | 23.53 | 6.9 |
| CDY09672 | Canola | golgi | 35.29 | 1.7 |
| CDX88785 | Canola | plasma membrane | 47.06 | 1.57 |
| CDX71011 | Canola | plasma membrane | 47.06 | 1.57 |
| CDY26949 | Canola | plasma membrane | 47.06 | 1.57 |
| CDY09164 | Canola | plasma membrane | 47.06 | 1.57 |
| CDY35710 | Canola | plasma membrane | 47.06 | 1.57 |
| CDY01129 | Canola | plasma membrane | 47.06 | 1.49 |
| CDY40295 | Canola | plasma membrane | 47.06 | 1.47 |
| CDY44151 | Canola | plasma membrane | 47.06 | 1.44 |
| CDY04707 | Canola | plasma membrane | 47.06 | 1.44 |
| CDY26505 | Canola | plasma membrane | 41.18 | 1.36 |
| CDX72181 | Canola | plasma membrane | 41.18 | 1.34 |
| CDY54604 | Canola | plasma membrane | 41.18 | 1.34 |
| CDY10358 | Canola | plasma membrane | 41.18 | 1.32 |
| CDY11268 | Canola | plasma membrane | 41.18 | 1.32 |
| CDX70286 | Canola | plasma membrane | 41.18 | 1.32 |
| CDY04011 | Canola | cytosol, peroxisome, plasma membrane | 35.29 | 1.31 |
| CDY00138 | Canola | cytosol, peroxisome, plasma membrane | 35.29 | 1.31 |
| CDY32098 | Canola | plasma membrane | 41.18 | 1.29 |
| Bra023020.1-P | Field mustard | plasma membrane | 41.18 | 1.28 |
| CDX79614 | Canola | plasma membrane | 41.18 | 1.27 |
| AT2G35650.1 | Thale cress | plasma membrane | 41.18 | 1.26 |
| CDX78675 | Canola | plasma membrane | 35.29 | 1.19 |
| CDY40448 | Canola | plasma membrane | 41.18 | 1.18 |
| CDX72314 | Canola | plasma membrane | 47.06 | 1.17 |
| CDY13445 | Canola | plasma membrane | 47.06 | 1.16 |
| CDX80885 | Canola | plasma membrane | 35.29 | 1.14 |
| CDX69464 | Canola | cytosol, peroxisome, plasma membrane | 29.41 | 1.13 |
| CDX90506 | Canola | plasma membrane | 35.29 | 1.08 |
| CDX85189 | Canola | plasma membrane | 41.18 | 1.07 |
| CDX86448 | Canola | plasma membrane | 41.18 | 1.07 |
| CDY20029 | Canola | plasma membrane | 41.18 | 1.06 |
| CDX76802 | Canola | plasma membrane | 41.18 | 1.06 |
| CDY34018 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 35.29 | 1.06 |
| CDX68766 | Canola | plasma membrane | 47.06 | 1.03 |
| CDY34762 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 41.18 | 1.02 |
| CDY60854 | Canola | plasma membrane | 47.06 | 0.91 |
| CDY32110 | Canola | mitochondrion | 23.53 | 0.91 |
| CDX70677 | Canola | cytosol, peroxisome, plasma membrane | 23.53 | 0.9 |
| CDX83148 | Canola | plasma membrane | 35.29 | 0.87 |
| CDX92340 | Canola | plasma membrane | 47.06 | 0.85 |
| CDX84607 | Canola | mitochondrion | 5.88 | 0.83 |
| CDY57881 | Canola | extracellular | 5.88 | 0.8 |
| CDY08003 | Canola | cytosol, peroxisome, plasma membrane | 29.41 | 0.72 |
| CDX74051 | Canola | cytosol, peroxisome, plasma membrane | 29.41 | 0.72 |
| CDY47369 | Canola | plasma membrane | 11.76 | 0.67 |
| CDY68733 | Canola | plasma membrane | 5.88 | 0.37 |
| CDX75177 | Canola | cytosol | 5.88 | 0.34 |
| CDY47235 | Canola | plasma membrane | 5.88 | 0.31 |
Protein Annotations
| EnsemblPlants:CDY32100 | EnsemblPlantsGene:GSBRNA2T00051455001 | ProteinID:CDY32100 | ProteinID:CDY32100.1 | UniParc:UPI0004EDD6E1 | UniProt:A0A078H0A6 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC04g44660DBnaC04g44660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0A6]
Coordinates
chrLK032287:-:297371..297424
Molecular Weight (calculated)
1954.4 Da
IEP (calculated)
4.421
GRAVY (calculated)
0.047
Length
17 amino acids
Sequence
(BLAST)
(BLAST)
1: MKLELVHLAD ENSQLTL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.