Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31590.1 | CDX70995 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDX88803 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDX92368 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDY09128 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDY35676 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023993.1-P | Field mustard | plasma membrane | 94.88 | 97.59 |
| CDY13445 | Canola | plasma membrane | 97.81 | 97.38 |
| AT4G31590.1 | Thale cress | plasma membrane | 94.88 | 93.79 |
| CDY34762 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 86.7 | 86.7 |
| CDX76802 | Canola | plasma membrane | 83.33 | 86.36 |
| CDX68766 | Canola | plasma membrane | 96.2 | 84.9 |
| VIT_04s0069g00780.t01 | Wine grape | plasma membrane | 81.73 | 80.55 |
| CDY04011 | Canola | cytosol, peroxisome, plasma membrane | 53.66 | 80.31 |
| CDY00138 | Canola | cytosol, peroxisome, plasma membrane | 53.22 | 79.65 |
| VIT_09s0018g01950.t01 | Wine grape | endoplasmic reticulum, peroxisome, plasma membrane | 80.56 | 79.51 |
| KRH61950 | Soybean | plasma membrane | 80.41 | 79.37 |
| KRH52609 | Soybean | plasma membrane | 79.82 | 78.79 |
| Os08t0253800-01 | Rice | cytosol, peroxisome, plasma membrane | 54.39 | 77.66 |
| CDY57881 | Canola | extracellular | 14.18 | 77.6 |
| KRH16165 | Soybean | plasma membrane | 77.19 | 76.19 |
| PGSC0003DMT400024646 | Potato | golgi, peroxisome, plasma membrane | 77.05 | 75.94 |
| Solyc08g006310.2.1 | Tomato | golgi, peroxisome, plasma membrane | 76.75 | 75.65 |
| KRH04930 | Soybean | plasma membrane | 76.46 | 75.47 |
| CDY60854 | Canola | plasma membrane | 96.2 | 75.2 |
| CDY34018 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 59.06 | 71.25 |
| CDX85189 | Canola | plasma membrane | 67.11 | 69.86 |
| CDX86448 | Canola | plasma membrane | 66.96 | 69.71 |
| CDY20029 | Canola | plasma membrane | 66.37 | 69.0 |
| CDX83148 | Canola | plasma membrane | 67.84 | 67.05 |
| HORVU3Hr1G000340.2 | Barley | plasma membrane | 63.16 | 66.87 |
| TraesCSU01G038900.1 | Wheat | cytosol, peroxisome, plasma membrane | 70.76 | 64.53 |
| TraesCS3B01G000600.1 | Wheat | cytosol, peroxisome, plasma membrane | 70.76 | 64.45 |
| TraesCS3D01G010500.1 | Wheat | cytosol, peroxisome, plasma membrane | 70.47 | 63.59 |
| Zm00001d024178_P002 | Maize | cytosol, peroxisome, plasma membrane | 70.18 | 63.41 |
| Zm00001d049336_P001 | Maize | plasma membrane | 70.76 | 63.35 |
| KXG24822 | Sorghum | peroxisome | 69.88 | 62.89 |
| KRH57821 | Soybean | plasma membrane | 21.34 | 60.58 |
| CDY08003 | Canola | cytosol, peroxisome, plasma membrane | 60.96 | 60.0 |
| CDX74051 | Canola | cytosol, peroxisome, plasma membrane | 60.67 | 59.37 |
| CDY47235 | Canola | plasma membrane | 27.49 | 57.67 |
| CDX75177 | Canola | cytosol | 21.78 | 51.2 |
| CDY32100 | Canola | cytosol | 1.17 | 47.06 |
| CDX69464 | Canola | cytosol, peroxisome, plasma membrane | 29.39 | 45.37 |
| CDX70677 | Canola | cytosol, peroxisome, plasma membrane | 29.39 | 45.37 |
| CDY09672 | Canola | golgi | 23.25 | 45.17 |
| CDY47369 | Canola | plasma membrane | 19.59 | 44.67 |
| CDY10358 | Canola | plasma membrane | 34.5 | 44.36 |
| CDY11268 | Canola | plasma membrane | 34.5 | 44.36 |
| CDX70286 | Canola | plasma membrane | 34.36 | 44.17 |
| CDX78675 | Canola | plasma membrane | 31.43 | 42.66 |
| CDY26505 | Canola | plasma membrane | 31.58 | 42.11 |
| CDY47368 | Canola | endoplasmic reticulum, extracellular | 3.51 | 41.38 |
| CDY32110 | Canola | mitochondrion | 26.61 | 41.36 |
| CDY35710 | Canola | plasma membrane | 30.85 | 41.29 |
| CDY40295 | Canola | plasma membrane | 32.89 | 41.21 |
| CDX79614 | Canola | plasma membrane | 33.19 | 41.2 |
| CDY09164 | Canola | plasma membrane | 30.56 | 40.98 |
| CDX88785 | Canola | plasma membrane | 30.56 | 40.98 |
| CDY01129 | Canola | plasma membrane | 32.16 | 40.89 |
| CDY26949 | Canola | plasma membrane | 30.41 | 40.78 |
| CDX71011 | Canola | plasma membrane | 30.41 | 40.78 |
| CDY32098 | Canola | plasma membrane | 32.16 | 40.52 |
| CDX72181 | Canola | plasma membrane | 30.85 | 40.34 |
| CDY44151 | Canola | plasma membrane | 32.6 | 40.18 |
| CDY04707 | Canola | plasma membrane | 32.6 | 40.18 |
| CDY54604 | Canola | plasma membrane | 30.56 | 39.89 |
| CDX90506 | Canola | plasma membrane | 31.14 | 38.52 |
| CDY68733 | Canola | plasma membrane | 15.2 | 38.24 |
| CDY40448 | Canola | plasma membrane | 32.31 | 37.33 |
| CDX80885 | Canola | plasma membrane | 27.92 | 36.38 |
| CDX84607 | Canola | mitochondrion | 4.97 | 28.33 |
| CDX92340 | Canola | plasma membrane | 30.7 | 22.22 |
Protein Annotations
| EnsemblPlants:CDX72314 | EnsemblPlantsGene:GSBRNA2T00099803001 | Gene3D:3.90.550.10 | GO:A0A078C7Z2 | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans |
| PANTHER:PTHR32044 | PANTHER:PTHR32044:SF7 | PFAM:PF13641 | ProteinID:CDX72314 | ProteinID:CDX72314.1 | SEG:seg |
| SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI0004EDD89A | MapMan:21.2.1.1.1 | : | : |
Description
BnaC07g43360D
Coordinates
chrLK031796:-:655457..658157
Molecular Weight (calculated)
78761.5 Da
IEP (calculated)
8.493
GRAVY (calculated)
0.105
Length
684 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIEGPDS AFRPEERTRG RKNAKQVTWV LLLKAHRAVG CLTWLATVFW SLLGSIKKRL SFTHPLGSER
101: LGRDRWLFSA IKLFLALSLL ILAFETVAYL RGCHYFENHI PTSTLEIQSL LHLVYVGWLG FRADYIAPLI KSLSKFCIVL FLIQSVDRLI LCLGCFWIKY
201: KKIKPRFDEE PYDAEGCGYV YPMVLVQIPM CNEREVYEQS ISAVCQLDWP KDRILVQVLD DSNDESIQQL IKAEVAKWSQ KGVNIIYRHR LVRTGYKAGN
301: LKSAMSCDYV EAYEFVAIFD ADFQPNPDFL KLTVPHFKDN PELGLVQARW TFVNKDENLL TRLQNINLCF HFEVEQQVSG VFLNFFGFNG TAGVWRIKAL
401: EESGGWLERT TVEDMDIAVR AHLHGWKFIY LNDVKVLCEV PESYEAYKKQ QHRWHSGPMQ LFRLCLGSIL TSKIAIWKKA NLILLFFLLR KLILPFYSFT
501: LFCIILPLTM FVPEAELPVW VICYIPVFMS FLNLLPSPKS FPFIVPYLLF ENTMSVTKFN AMVSGLFQLG SSYEWVVTKK AGRSSESDLL SITEKETLDK
601: KSQLLRGVSD SELLELNQLE EQKQKKPVKK TNKIFHKELA LAFLLLTAAV RSLLAAQGVH FYFLLFQGVT FLLVGLDLIG EQMS
101: LGRDRWLFSA IKLFLALSLL ILAFETVAYL RGCHYFENHI PTSTLEIQSL LHLVYVGWLG FRADYIAPLI KSLSKFCIVL FLIQSVDRLI LCLGCFWIKY
201: KKIKPRFDEE PYDAEGCGYV YPMVLVQIPM CNEREVYEQS ISAVCQLDWP KDRILVQVLD DSNDESIQQL IKAEVAKWSQ KGVNIIYRHR LVRTGYKAGN
301: LKSAMSCDYV EAYEFVAIFD ADFQPNPDFL KLTVPHFKDN PELGLVQARW TFVNKDENLL TRLQNINLCF HFEVEQQVSG VFLNFFGFNG TAGVWRIKAL
401: EESGGWLERT TVEDMDIAVR AHLHGWKFIY LNDVKVLCEV PESYEAYKKQ QHRWHSGPMQ LFRLCLGSIL TSKIAIWKKA NLILLFFLLR KLILPFYSFT
501: LFCIILPLTM FVPEAELPVW VICYIPVFMS FLNLLPSPKS FPFIVPYLLF ENTMSVTKFN AMVSGLFQLG SSYEWVVTKK AGRSSESDLL SITEKETLDK
601: KSQLLRGVSD SELLELNQLE EQKQKKPVKK TNKIFHKELA LAFLLLTAAV RSLLAAQGVH FYFLLFQGVT FLLVGLDLIG EQMS
001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS
Arabidopsis Description
CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.