CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47369	Canola	plasma membrane	52.23	93.67
AT4G13410.1	Thale cress	extracellular, plasma membrane	83.83	83.99
CDX69464	Canola	cytosol, peroxisome, plasma membrane	67.29	81.72
CDX70677	Canola	cytosol, peroxisome, plasma membrane	66.91	81.26
CDX78675	Canola	plasma membrane	75.09	80.16
CDY26505	Canola	plasma membrane	75.65	79.34
CDY47368	Canola	endoplasmic reticulum, extracellular	8.36	77.59
CDY68733	Canola	plasma membrane	38.48	76.1
Bra032705.1-P	Field mustard	plasma membrane	97.96	74.02
CDY40295	Canola	plasma membrane	74.72	73.63
CDY09672	Canola	golgi	42.75	65.34
CDX90506	Canola	plasma membrane	64.5	62.75
CDY44151	Canola	plasma membrane	62.64	60.72
CDY04707	Canola	plasma membrane	62.45	60.54
CDY11268	Canola	plasma membrane	59.11	59.77
CDY10358	Canola	plasma membrane	58.92	59.59
CDX70286	Canola	plasma membrane	58.92	59.59
CDX72181	Canola	plasma membrane	57.43	59.08
CDY54604	Canola	plasma membrane	57.06	58.59
CDY35710	Canola	plasma membrane	54.83	57.73
CDY09164	Canola	plasma membrane	54.46	57.45
CDY26949	Canola	plasma membrane	54.28	57.25
CDX88785	Canola	plasma membrane	54.09	57.06
CDX71011	Canola	plasma membrane	53.9	56.86
CDY32098	Canola	plasma membrane	56.32	55.8
CDY32110	Canola	mitochondrion	44.8	54.77
Os02t0744650-00	Rice	cytosol, mitochondrion, peroxisome, plasma membrane	40.52	54.36
CDX79614	Canola	plasma membrane	55.58	54.27
CDX80885	Canola	plasma membrane	51.3	52.57
CDY40448	Canola	plasma membrane	56.88	51.69
CDY32100	Canola	cytosol	1.49	47.06
CDY04011	Canola	cytosol, peroxisome, plasma membrane	38.29	45.08
CDY00138	Canola	cytosol, peroxisome, plasma membrane	38.1	44.86
CDX84607	Canola	mitochondrion	9.11	40.83
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	39.96	37.92
CDX85189	Canola	plasma membrane	42.57	34.86
CDX86448	Canola	plasma membrane	42.57	34.86
CDY20029	Canola	plasma membrane	42.19	34.5
CDY57881	Canola	extracellular	7.99	34.4
CDX76802	Canola	plasma membrane	40.52	33.03
CDX72314	Canola	plasma membrane	40.89	32.16
CDY34762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	40.71	32.02
CDX83148	Canola	plasma membrane	40.71	31.65
CDY13445	Canola	plasma membrane	40.33	31.59
CDX92340	Canola	plasma membrane	54.28	30.9
CDY08003	Canola	cytosol, peroxisome, plasma membrane	38.85	30.07
CDX74051	Canola	cytosol, peroxisome, plasma membrane	38.85	29.9
Os02t0744600-01	Rice	endoplasmic reticulum, extracellular	1.3	29.17
CDX68766	Canola	plasma membrane	41.08	28.52
TraesCS2B01G370500.1	Wheat	cytosol	7.25	27.66
CDX75177	Canola	cytosol	14.5	26.8
CDY60854	Canola	plasma membrane	41.26	25.37
CDY47235	Canola	plasma membrane	11.34	18.71

Protein Annotations

EnsemblPlants:CDY01129	EnsemblPlantsGene:GSBRNA2T00111196001	Gene3D:3.90.550.10	GO:A0A078EK76	InterPro:Glyco_trans_2-like	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21	PFAM:PF13632	ProteinID:CDY01129	ProteinID:CDY01129.1
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0004EEC8CF	MapMan:21.2.3.1.1.1	:	:

Description

BnaA04g06900DProbable mannan synthase 15 [Source:Projected from Arabidopsis thaliana (AT4G13410) UniProtKB/Swiss-Prot;Acc:Q9T0L2]

Coordinates

chrLK031924:-:297221..308903

Molecular Weight (calculated)

62393.9 Da

IEP (calculated)

8.441

GRAVY (calculated)

0.202

Length

538 amino acids

Sequence
(BLAST)

001: MVLLPKPLIF LHDSSLALLT FHEEGLKASV DGVGLSMYTM WNSMRSTLIV PVFRCLVALC LIISLLVSIE SVYMNLVILY VKLFDRKPEK VYKWEEMQKD
101: MELGHQKYPV VLIQIPMYNE REVFELSIGA ACRLMWPSDR LIVQVLDDST DPDIMELIST ECAKWAKDIN IKYERRDNRN GYKAGALKHG MRHSYVKQCN
201: YVVIFDADFQ PETDYLQRTI PFLIHNPELA LVQARWKFVN ANTCLLTRMQ EMSLNYHFMA EQQSGSTRHA FFGFNGTAGV WRIAAMEEAG GWKDRTTVED
301: MDLAVRVGLL GWKFVFINDV EVKSELPSQF KAFRFQQHRW SCGPANLFRK MTMEIIHNQR VKTWKKFYVI YSFFFLRKIM IHSFTFFFYC VILPISVFVP
401: EVKIPNWATI YVPSVITLLS AIATLRSFYL LIFWVLFENV MAMHRAKGTL IGLFEGGRVN EWVVTEKLGD SVTIELLPQS RKPRYGFLER VNSKEMVMGI
501: YILCCACYDF FFGNAFLYIY LLMQAAAFLI SGVGFVGS

Best Arabidopsis Sequence Match ( AT4G13410.1 )
(BLAST)

001: MFLLLKPLLS LHDLSLNLLS VMFHGETLKA SVDGVGINMS TMWRETRNVF IVPLFKCIVV MCLIISLLVF VESVYMNLVV LYVKLFNRKP EKVYKWEAMQ
101: EDMELGHQNY PMVLVQIPMY NEREVFELSI GAACRLTWPS DRLIVQVLDD STDPAIMELV SMECTKWASK DININYERRE NRNGYKAGAL KHGMRHSYVK
201: QCQYLAIFDA DFQPEPDYLQ RAIPFLIHNP EVALVQARWR FVNANTCLMT RMQEMSLNYH FMAEQQSGST RHAFFGFNGT AGVWRMVAME EAGGWKDRTT
301: VEDMDLAVRV GLLGWKFIFV NDLEVKSELP SQFKAFRFQQ HRWSCGPANL IRKMTMEIIH NKRVKIWKKF YVIYSFFFLR KIVVHFFTYF FYCVILPTSV
401: FLPEVNIPNW STIYVPSVIT LLSAIATPRS FYLVIFWVLF ENVMAMHRTK GTLIGLFEGG RVNEWVVTEK LGDTLNTKLL PQNGRLPKRV NLKEMMMGIY
501: ILCCACYDFA FGNAFLYLYL FMQATAFLIS GVGFVGT

Arabidopsis Description

CSLA15Probable mannan synthase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0L2]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.