Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0766900-01 | Rice | golgi, plasma membrane | 29.17 | 4.07 |
| Os10t0406400-00 | Rice | plasma membrane | 29.17 | 2.86 |
| CDY47369 | Canola | plasma membrane | 25.0 | 2.0 |
| Os06t0625700-01 | Rice | plasma membrane | 41.67 | 1.9 |
| Os08t0253800-01 | Rice | cytosol, peroxisome, plasma membrane | 37.5 | 1.88 |
| Os02t0192500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 33.33 | 1.54 |
| CDY01129 | Canola | plasma membrane | 29.17 | 1.3 |
| Os03t0169500-01 | Rice | plasma membrane | 29.17 | 1.28 |
| Os09t0428000-00 | Rice | cytosol, peroxisome | 25.0 | 1.24 |
| Os03t0770800-01 | Rice | plasma membrane | 29.17 | 1.17 |
| Os03t0377700-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 25.0 | 1.05 |
| Os07t0630900-02 | Rice | plasma membrane | 25.0 | 1.03 |
| Os05t0510800-01 | Rice | plasma membrane | 29.17 | 1.02 |
| AT4G13410.1 | Thale cress | extracellular, plasma membrane | 20.83 | 0.93 |
| Bra032705.1-P | Field mustard | plasma membrane | 25.0 | 0.84 |
| Os07t0124750-00 | Rice | plasma membrane | 25.0 | 0.84 |
| Os09t0572500-01 | Rice | golgi, mitochondrion, plasma membrane, plastid | 4.17 | 0.18 |
| Os06t0230100-00 | Rice | nucleus | 0.0 | 0.0 |
| Os08t0434632-01 | Rice | cytosol | 0.0 | 0.0 |
| Os02t0744650-00 | Rice | cytosol, mitochondrion, peroxisome, plasma membrane | 0.0 | 0.0 |
| Os09t0439100-01 | Rice | cytosol | 0.0 | 0.0 |
| CDY47368 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| TraesCS2B01G370500.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os02t0744600-01 | EnsemblPlantsGene:Os02g0744600 | ProteinID:BAS80887.1 | UniParc:UPI000393979D | UniProt:A0A0P0VPI7 | MapMan:35.2 |
Description
CELLULOSE SYNTHASE LIKE A6Hypothetical conserved gene. (Os02t0744600-01)
Coordinates
chr2:-:31228398..31228830
Molecular Weight (calculated)
2656.3 Da
IEP (calculated)
3.850
GRAVY (calculated)
1.492
Length
24 amino acids
Sequence
(BLAST)
(BLAST)
1: IFLLSQSIIY FAIGFEFMGV SVSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.