Factsheet for Os03t0169500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0406400-00	Rice	plasma membrane	37.34	83.67
EER95427	Sorghum	plasma membrane	82.33	82.63
Zm00001d048319_P003	Maize	plasma membrane	78.32	77.48
Os08t0434632-01	Rice	cytosol	10.56	76.32
Os09t0439100-01	Rice	cytosol	12.57	75.82
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	61.75	63.36
Os06t0625700-01	Rice	plasma membrane	58.47	60.91
Os02t0192500-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	56.47	59.5
Os03t0377700-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	58.11	55.57
Os02t0744650-00	Rice	cytosol, mitochondrion, peroxisome, plasma membrane	40.07	54.86
Os07t0630900-02	Rice	plasma membrane	56.28	52.82
Os06t0230100-00	Rice	nucleus	48.45	43.04
Os09t0428000-00	Rice	cytosol, peroxisome	37.16	42.06
Os09t0572500-01	Rice	golgi, mitochondrion, plasma membrane, plastid	41.17	41.77
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	34.24	39.25
Os03t0770800-01	Rice	plasma membrane	38.8	35.74
Os05t0510800-01	Rice	plasma membrane	39.34	31.4
Os07t0124750-00	Rice	plasma membrane	39.34	30.21
Os02t0744600-01	Rice	endoplasmic reticulum, extracellular	1.28	29.17
Os01t0766900-01	Rice	golgi, plasma membrane	8.93	28.49

Protein Annotations

MapMan:21.2.3.1.1.1	Gene3D:3.90.550.10	EntrezGene:4331764	ProteinID:AAL84294.1	ProteinID:ABF94194.1	EMBL:AK287855
ProteinID:BAF11014.2	ProteinID:BAS82512.1	ProteinID:DAA01745.1	ProteinID:EEE58400.1	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016740	GO:GO:0016757	GO:GO:0047259	GO:GO:0071555	GO:GO:0097502	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	EnsemblPlantsGene:Os03g0169500	EnsemblPlants:Os03t0169500-01	PFAM:PF13641	PANTHER:PTHR32044	PANTHER:PTHR32044:SF43
UniProt:Q8S7W0	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI00000A6738	RefSeq:XP_015630733.1	SEG:seg

Description

CELLULOSE SYNTHASE LIKE A4Similar to Cellulose synthase-like A1. (Os03t0169500-01)

Coordinates

chr3:+:3729174..3733685

Molecular Weight (calculated)

61892.7 Da

IEP (calculated)

8.087

GRAVY (calculated)

0.157

Length

549 amino acids

Sequence
(BLAST)

001: MEGQWGRWRL AAAAAASSSG DQIAAAWAVV RARAVAPVLQ FAVWACMAMS VMLVLEVAYM SLVSLVAVKL LRRVPERRYK WEPITTGSGG VGGGDGEDEE
101: AATGGREAAA FPMVLVQIPM YNEKEVYKLS IGAACALTWP PDRIIIQVLD DSTDPAIKDL VELECKDWAR KEINIKYEIR DNRKGYKAGA LKKGMEHIYT
201: QQCDFVAIFD ADFQPESDFL LKTIPFLVHN PKIGLVQTRW EFVNYDVCLM TRIQKMSLDY HFKVEQESGS SMHSFFGFNG TAGVWRVSAI NEAGGWKDRT
301: TVEDMDLAVR ASLKGWQFLY VGDIRVKSEL PSTFKAYRHQ QHRWTCGAAN LFRKMATEIA KNKGVSVWKK LHLLYSFFFV RRVVAPILTF LFYCVVIPLS
401: VMVPEVSIPV WGMVYIPTAI TIMNAIRNPG SIHLMPFWIL FENVMAMHRM RAALTGLLET MNVNQWVVTE KVGDHVKDKL EVPLLEPLKP TDCVERIYIP
501: ELMVAFYLLV CASYDLVLGA KHYYLYIYLQ AFAFIALGFG FAGTSTPCS

Best Arabidopsis Sequence Match ( AT5G03760.1 )
(BLAST)

001: MELGDTTSVI PDSFMGYRDD ITMQMSMVLD QIRAPLIVPA LRLGVYICLT MSVMLFVERV YMGIVISLVK LFGRKPDKRF KYEPIKDDIE LGNSAYPMVL
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH

Arabidopsis Description

CSLA9RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.