Factsheet for Os10t0406400-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
golgi 3
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	golgi, plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032994_P002	Maize	plasma membrane	88.98	42.41
TraesCS6B01G135100.1	Wheat	plastid	87.35	40.53
TraesCS6A01G105800.1	Wheat	plasma membrane, plastid	86.53	40.15
TraesCS6D01G094300.1	Wheat	plasma membrane, plastid	86.53	39.92
HORVU6Hr1G018840.1	Barley	plastid	86.53	38.69
Os03t0169500-01	Rice	plasma membrane	83.67	37.34
OQU91819	Sorghum	plasma membrane	88.16	34.95
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	66.12	30.28
Os02t0744600-01	Rice	endoplasmic reticulum, extracellular	2.86	29.17
Os01t0766900-01	Rice	golgi, plasma membrane	20.41	29.07
Os02t0192500-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	54.29	25.53
Os06t0625700-01	Rice	plasma membrane	53.06	24.67
Os02t0744650-00	Rice	cytosol, mitochondrion, peroxisome, plasma membrane	40.0	24.44
Os03t0377700-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	50.61	21.6
Os07t0630900-02	Rice	plasma membrane	50.61	21.2
Os09t0428000-00	Rice	cytosol, peroxisome	36.33	18.35
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	35.51	18.16
Os06t0230100-00	Rice	nucleus	45.71	18.12
Os03t0770800-01	Rice	plasma membrane	36.33	14.93
Os05t0510800-01	Rice	plasma membrane	37.55	13.37
Os07t0124750-00	Rice	plasma membrane	35.92	12.31
Os09t0572500-01	Rice	golgi, mitochondrion, plasma membrane, plastid	24.9	11.28
Os09t0439100-01	Rice	cytosol	3.67	9.89
Os08t0434632-01	Rice	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Os10t0406400-00	EnsemblPlantsGene:Os10g0406400	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Glyco_trans_2-like
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF22	PFAM:PF13632	ProteinID:BAT10777.1
SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000393A5A0	UniProt:A0A0P0XUF8	MapMan:50.2.4

Description

CELLULOSE SYNTHASE LIKE A2Similar to Cellulose synthase-like A1. (Os10t0406400-00)

Coordinates

chr10:-:13896201..13897680

Molecular Weight (calculated)

28246.0 Da

IEP (calculated)

8.442

GRAVY (calculated)

0.367

Length

245 amino acids

Sequence
(BLAST)

001: MDLAVRASLK GWEFLYVGDI RVKSELPSTF QAYRHQQHRW TCGAANLFRK MAWEIITNKE VSMWKKYHLL YSFFFVRRAI APILTFLFYC IVIPLSAMVP
101: EVTIPVWGLV YIPTAITIMN AIRNPGSVHL MPFWILFENV MAMHRMRAAL SGLLETARAN DWVVTEKVGD QVKDELDVPL LEPLKPTECA ERIYIPELLL
201: ALYLLICASY DFVLGNHKYY IYIYLQAVAF TVMGFGFVGT RTPCS

Best Arabidopsis Sequence Match ( AT1G23480.1 )
(BLAST)

001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV

Arabidopsis Description

CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.