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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os07t0630900-02 Rice plasma membrane 72.82 71.45
Os08t0434632-01 Rice cytosol 9.23 69.74
Os03t0169500-01 Rice plasma membrane 55.57 58.11
Os09t0439100-01 Rice cytosol 9.06 57.14
Os06t0625700-01 Rice plasma membrane 49.13 53.51
Os02t0192500-01 Rice cytosol, endoplasmic reticulum, plasma membrane 48.08 52.98
Os10t0406400-00 Rice plasma membrane 21.6 50.61
Os02t0744650-00 Rice cytosol, mitochondrion, peroxisome, plasma membrane 34.67 49.63
Os09t0428000-00 Rice cytosol, peroxisome 35.54 42.06
Os06t0230100-00 Rice nucleus 42.86 39.81
Os08t0253800-01 Rice cytosol, peroxisome, plasma membrane 33.1 39.67
Os09t0572500-01 Rice golgi, mitochondrion, plasma membrane, plastid 35.89 38.08
Os03t0770800-01 Rice plasma membrane 36.59 35.23
Os05t0510800-01 Rice plasma membrane 39.2 32.7
Os07t0124750-00 Rice plasma membrane 39.37 31.61
Os01t0766900-01 Rice golgi, plasma membrane 8.01 26.74
Os02t0744600-01 Rice endoplasmic reticulum, extracellular 1.05 25.0
Protein Annotations
MapMan:21.2.3.1.1.1Gene3D:3.90.550.10EntrezGene:4332966ProteinID:AAL82530.1ProteinID:ABF96237.1EMBL:AK111424
ProteinID:BAF12143.1ProteinID:BAS84424.1ProteinID:DAA01746.1ProteinID:EEE59143.1GO:GO:0000139GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016043
GO:GO:0016740GO:GO:0016757GO:GO:0047259GO:GO:0071555GO:GO:0097502InterPro:Glyco_trans_2-like
InterPro:IPR029044InterPro:Nucleotide-diphossugar_transEnsemblPlantsGene:Os03g0377700EnsemblPlants:Os03t0377700-01PFAM:PF13632PANTHER:PTHR32044
PANTHER:PTHR32044:SF12UniProt:Q7PC73SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI00000A4ED4RefSeq:XP_015627865.1
SEG:seg:::::
Description
CELLULOSE SYNTHASE LIKE A5Cellulose synthase-like A5. (Os03t0377700-01)
Coordinates
chr3:-:14926417..14930396
Molecular Weight (calculated)
64007.0 Da
IEP (calculated)
8.625
GRAVY (calculated)
0.237
Length
574 amino acids
Sequence
(BLAST)
001: MEAGEAAGAV LFLLAAAVSL LAAVSTGALD FTYLVTVVGE GSSTSPGSGG GAWWREAWVG ARSRAVAPAL QVGVWACMVM SVMLVVEATY NSAVSVAARL
101: VGWRPERWFK WEPLGGGAGA GDEEKGEAAA AAYPMVMVQI PMYNELEVYK LSIGAVCGLK WPKERLIIQV LDDSTDAFIK NLVELECEDW ASKGLNIKYA
201: TRSGRKGFKA GALKKGMEWD YAKQCEYVAI FDADFQPEPD FLLRTVPFLM HNQNVALVQA RWVFVNDRVS LLTRIQKTFL DYHFKAEQEA GSATFAFFSF
301: NGTAGVWRTE AINDAGGWKD RTTVEDMDLA VRATLKGWKF IYLGDLRVKS ELPSTYKAYC RQQFRWSCGG ANLFRKMIWD VLVAKKVSSL KKIYILYSFF
401: LVRRVVAPAV AFILYNVIIP VSVMIPELFL PIWGVAYIPT ALLIVTAIRN PENLHTVPLW ILFESVMSMH RLRAAVAGLL QLQEFNQWIV TKKVGNNAFD
501: ENNETPLLQK SRKRLINRVN LPEIGLSVFL IFCASYNLVF HGKNSFYINL YLQGLAFFLL GLNCVGTLPD HCCF
Best Arabidopsis Sequence Match ( AT5G03760.1 )
(BLAST)
001: MELGDTTSVI PDSFMGYRDD ITMQMSMVLD QIRAPLIVPA LRLGVYICLT MSVMLFVERV YMGIVISLVK LFGRKPDKRF KYEPIKDDIE LGNSAYPMVL
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH
Arabidopsis Description
CSLA9RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.