Factsheet for Os06t0230100-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0434632-01	Rice	cytosol	8.41	68.42
OQU76114	Sorghum	plasma membrane	53.88	67.96
TraesCS7D01G190000.1	Wheat	plasma membrane	57.28	64.95
TraesCS7A01G189100.2	Wheat	plasma membrane	57.77	64.79
TraesCS7B01G093900.1	Wheat	plasma membrane	57.12	64.53
Zm00001d037235_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	55.66	63.7
HORVU7Hr1G038440.1	Barley	cytosol, nucleus	58.41	63.44
GSMUA_Achr9P26980_001	Banana	plasma membrane	29.77	61.54
Os09t0439100-01	Rice	cytosol	9.06	61.54
Os02t0744650-00	Rice	cytosol, mitochondrion, peroxisome, plasma membrane	35.44	54.61
GSMUA_Achr9P26970_001	Banana	endoplasmic reticulum, extracellular	15.53	50.53
Os06t0625700-01	Rice	plasma membrane	42.72	50.09
Os02t0192500-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	41.75	49.52
Os03t0169500-01	Rice	plasma membrane	43.04	48.45
Os10t0406400-00	Rice	plasma membrane	18.12	45.71
Os03t0377700-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	39.81	42.86
Os07t0630900-02	Rice	plasma membrane	39.64	41.88
Os09t0428000-00	Rice	cytosol, peroxisome	29.45	37.53
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	27.67	35.7
Os09t0572500-01	Rice	golgi, mitochondrion, plasma membrane, plastid	29.45	33.64
Os03t0770800-01	Rice	plasma membrane	29.61	30.7
Os05t0510800-01	Rice	plasma membrane	31.23	28.05
Os07t0124750-00	Rice	plasma membrane	31.07	26.85
Os01t0766900-01	Rice	golgi, plasma membrane	5.66	20.35
Os02t0744600-01	Rice	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

MapMan:21.2.3.1.1.1	Gene3D:3.90.550.10	UniProt:A0A0P0WUA1	ProteinID:BAS96904.1	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016740
GO:GO:0016757	GO:GO:0071555	InterPro:Glyco_trans_2-like	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	EnsemblPlantsGene:Os06g0230100
EnsemblPlants:Os06t0230100-00	PFAM:PF13632	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21	SUPFAM:SSF53448	UniParc:UPI000393AAD3
SEG:seg	:	:	:	:	:

Description

CELLULOSE SYNTHASE LIKE A3Similar to Cellulose synthase-like A1. (Os06t0230100-00)

Coordinates

chr6:+:6757996..6762787

Molecular Weight (calculated)

69781.0 Da

IEP (calculated)

10.716

GRAVY (calculated)

-0.393

Length

618 amino acids

Sequence
(BLAST)

001: MGSHPGGLES IFDSSLKYTQ NKKAKRRPGR TEAHRKAAAA ATRADDRLKR QSRAVSTRAR GPWPWPAPTG PPPAPQRRCG GEAASPSSCC CCGGRRLPSW
101: WRRGARRARR PWRRRSRPRP PRAWRSPPCS SPTPCSWPPP ASPAAAPTGG TARPRSAPAP APTTTTTTRR PAASPTPWCS SKSPCTTRGR YAPTYFLTVR
201: IRAGSRVKST KSVKPYPYAY TARVRTAHLG SVWSQVYKLS IGAACGLSWP SDRLIVQVLD DSTDPTVKGL VELECKSWGN KGKNVKYEVR NTRKGYKAGA
301: LKEGLLRDYV QQCNYVAIFD ADFQPEPDFL LRTIPYLVRN PQIGLVQAHW EFVNTSECLM TRIQKMTLHY HFKVEQEGGS STFAFFGFNG TAGVWRISAL
401: EEAGGWKDRT TVEDMDLAVR AGLKGWKFVY LADVKVKSEL PSNLKTYRHQ QHRWTCGAAN LFRKVGAEIL FTKEVPFWWK FYLLYSFFFV RKVVAHVVPF
501: MLYCVVIPFS VLIPEVTVPV WGVVYVPTTI TLLHAIRNTS SIHFIPFWIL FENVMSFHRT KAMFIGLLEL GGVNEWVVTE KLGNGSNTKP ASQILERPPC
601: RFWDRYKIDR DIKIFDQY

Best Arabidopsis Sequence Match ( AT1G23480.1 )
(BLAST)

001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV

Arabidopsis Description

CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.