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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • mitochondrion 2
  • golgi 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0770800-01 Rice plasma membrane 70.63 84.73
HORVU1Hr1G067470.1 Barley plasma membrane 79.58 82.82
TraesCS1D01G312700.1 Wheat plasma membrane 79.72 82.61
TraesCS1A01G312600.1 Wheat mitochondrion, plasma membrane 78.6 81.45
KXG34323 Sorghum plasma membrane 77.06 80.79
TraesCS1B01G324200.1 Wheat mitochondrion 77.76 80.58
GSMUA_Achr7P00750_001 Banana plasma membrane 69.09 79.17
Os01t0766900-01 Rice golgi, plasma membrane 18.88 78.49
GSMUA_Achr4P32270_001 Banana plasma membrane 69.93 78.37
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 67.97 78.14
GSMUA_Achr5P01920_001 Banana plasma membrane 69.09 76.71
GSMUA_Achr6P30200_001 Banana cytosol 65.31 75.69
Os09t0428000-00 Rice cytosol, peroxisome 51.05 75.26
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 59.44 74.96
GSMUA_Achr4P23120_001 Banana cytosol, peroxisome, plasma membrane 72.59 73.72
Os05t0510800-01 Rice plasma membrane 70.63 73.4
VIT_18s0001g08580.t01 Wine grape cytosol, peroxisome, plasma membrane 70.21 71.82
Os08t0253800-01 Rice cytosol, peroxisome, plasma membrane 47.97 71.61
Bra000635.1-P Field mustard plasma membrane 68.67 70.95
CDX83148 Canola plasma membrane 68.67 70.95
KRH15467 Soybean plasma membrane 68.39 69.96
AT4G07960.1 Thale cress plasma membrane 68.11 69.67
KRH61452 Soybean plasma membrane 68.95 69.63
KRH52142 Soybean plasma membrane 68.39 69.26
Solyc12g088240.1.1 Tomato cytosol, peroxisome, plasma membrane 65.31 67.88
PGSC0003DMT400030125 Potato plasma membrane 63.22 67.87
PGSC0003DMT400012668 Potato plasma membrane 67.55 65.09
Solyc04g077470.2.1 Tomato plasma membrane 67.27 64.82
Os08t0434632-01 Rice cytosol 6.01 56.58
Os02t0192500-01 Rice cytosol, endoplasmic reticulum, plasma membrane 32.59 44.72
Os09t0439100-01 Rice cytosol 5.59 43.96
Os06t0625700-01 Rice plasma membrane 30.91 41.94
Os02t0744650-00 Rice cytosol, mitochondrion, peroxisome, plasma membrane 23.5 41.9
Os03t0377700-01 Rice endoplasmic reticulum, plasma membrane, vacuole 31.61 39.37
Os03t0169500-01 Rice plasma membrane 30.21 39.34
Os07t0630900-02 Rice plasma membrane 31.47 38.46
Os10t0406400-00 Rice plasma membrane 12.31 35.92
Os09t0572500-01 Rice golgi, mitochondrion, plasma membrane, plastid 23.92 31.61
Os06t0230100-00 Rice nucleus 26.85 31.07
Os02t0744600-01 Rice endoplasmic reticulum, extracellular 0.84 25.0
Protein Annotations
MapMan:21.2.1.1.1Gene3D:3.90.550.10UniProt:A0A0P0X1U1ProteinID:BAS99891.1GO:GO:0000139GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016740
GO:GO:0016757GO:GO:0071555InterPro:Glyco_trans_2-likeInterPro:IPR029044InterPro:Nucleotide-diphossugar_transEnsemblPlantsGene:Os07g0124750
EnsemblPlants:Os07t0124750-00PFAM:PF13632PANTHER:PTHR32044PANTHER:PTHR32044:SF47SUPFAM:SSF53448SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI000393C2D5SEG:seg:::
Description
CELLULOSE SYNTHASE LIKE C10Similar to cDNA clone:J033097L05, full insert sequence. (Os07t0124750-00)
Coordinates
chr7:-:1305328..1308048
Molecular Weight (calculated)
80499.9 Da
IEP (calculated)
8.714
GRAVY (calculated)
0.050
Length
715 amino acids
Sequence
(BLAST)
001: MAPWSGFWAA SRPALAAAAA GGTPVVVKMD NPNWSISEID ADGGEFLAGG RRRGRGKNAK QITWVLLLKA HRAAGCLAWL ASAAVALGAA ARRRVAAGRT
101: DDADAETPAP RSRLYAFIRA SLLLSVFLLA VELAAHANGR GRVLAASVDS FHSSWVRFRA AYVAPPLQLL ADACVVLFLV QSADRLVQCL GCLYIHLNRI
201: KPKPISSPAA AAAALPDLED PDAGDYYPMV LVQIPMCNEK EVYIQAQTPL TNCPQISNFS PKHSNFVQFQ VYQQSIAAVC NLDWPRSNIL VQVLDDSDDP
301: ITQSLIKEEV EKWRQNGARI VYRHRVLREG YKAGNLKSAM SCSYVKDYEY VAIFDADFQP YPDFLKRTVP HFKDNEELGL VQARWSFVNK DENLLTRLQN
401: INLCFHFEVE QQVNGIFINF FGFNGTAGVW RIKALEDSGG WMERTTVEDM DIAVRAHLNG WKFVFLNDVE CQCELPESYE AYRKQQHRWH SGPMQLFRLC
501: LPDIIRCKIA FWKKANLIFL FFLLRKLILP FYSFTLFCII LPMTMFIPEA ELPDWVVCYI PALMSFLNIL PAPKSFPFII PYLLFENTMS VTKFNAMISG
601: LFQLGSAYEW VVTKKSGRSS EGDLIALAPK ELKQQKILDL TAIKEQSMLK QSSPRNEAKK KYNRIYKKEL ALSLLLLTAA ARSLLSKQGI HFYFLMFQGL
701: SFLLVGLDLI GEDVK
Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)
001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE
Arabidopsis Description
CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.