Factsheet for TraesCS1D01G312700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G312600.1	Wheat	mitochondrion, plasma membrane	95.51	95.51
TraesCS1B01G324200.1	Wheat	mitochondrion	95.07	95.07
HORVU1Hr1G067470.1	Barley	plasma membrane	89.28	89.67
Os07t0124750-00	Rice	plasma membrane	82.61	79.72
GSMUA_Achr7P00750_001	Banana	plasma membrane	70.43	77.88
KXG34323	Sorghum	plasma membrane	76.38	77.27
GSMUA_Achr4P32270_001	Banana	plasma membrane	71.16	76.96
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	69.13	76.69
GSMUA_Achr5P01920_001	Banana	plasma membrane	70.58	75.62
GSMUA_Achr6P30200_001	Banana	cytosol	66.09	73.91
TraesCS5D01G415700.1	Wheat	mitochondrion	78.41	73.51
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	59.86	72.84
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	71.88	70.45
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	70.58	69.67
KRH15467	Soybean	plasma membrane	69.42	68.53
CDX83148	Canola	plasma membrane	68.12	67.92
TraesCS3D01G302300.1	Wheat	plasma membrane	69.28	67.9
KRH52142	Soybean	plasma membrane	69.42	67.85
KRH61452	Soybean	plasma membrane	69.57	67.8
Bra000635.1-P	Field mustard	plasma membrane	67.97	67.77
TraesCS1D01G334400.1	Wheat	plasma membrane	68.84	67.66
AT4G07960.1	Thale cress	plasma membrane	68.12	67.24
PGSC0003DMT400030125	Potato	plasma membrane	63.91	66.22
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	65.36	65.55
Solyc04g077470.2.1	Tomato	plasma membrane	67.68	62.94
PGSC0003DMT400012668	Potato	plasma membrane	67.54	62.8
TraesCS3D01G010500.1	Wheat	cytosol, peroxisome, plasma membrane	60.72	55.28
TraesCS6D01G158600.1	Wheat	plasma membrane	33.48	44.59
TraesCS7D01G389500.1	Wheat	plasma membrane, plastid	32.75	43.21
TraesCS7D01G389400.1	Wheat	plasma membrane	31.59	42.58
TraesCS7D01G190000.1	Wheat	plasma membrane	31.88	40.37
TraesCS2D01G532800.1	Wheat	plasma membrane	30.58	40.11
TraesCS7D01G544700.1	Wheat	golgi	30.14	40.0
TraesCS2D01G163000.2	Wheat	plasma membrane	33.04	39.24
TraesCS6D01G094300.1	Wheat	plasma membrane, plastid	30.14	39.17
TraesCS7D01G389100.1	Wheat	plasma membrane	31.01	38.56
TraesCS3D01G485600.1	Wheat	plasma membrane	30.14	38.17
TraesCS3D01G504200.1	Wheat	plasma membrane	31.59	38.11
TraesCS3D01G027600.1	Wheat	plasma membrane	30.29	36.67
TraesCS3D01G015000.1	Wheat	plasma membrane	29.57	35.92

Protein Annotations

EnsemblPlants:TraesCS1D01G312700.1	EnsemblPlantsGene:TraesCS1D01G312700	Gene3D:3.90.550.10	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044
PANTHER:PTHR32044:SF47	PFAM:PF13641	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	MapMan:21.2.1.1.1

Description

No Description!

Coordinates

chr1D:+:408511734..408514436

Molecular Weight (calculated)

78358.5 Da

IEP (calculated)

9.040

GRAVY (calculated)

0.022

Length

690 amino acids

Sequence
(BLAST)

001: MAPWNGLWGG RAAIAGGNAY RDMPVIVKME NPNWSISEIN GGGDNGEDFL ARVGGQRRRV KNTKQITWVF RLKAHRAAGC LARLTSAAVA LGGAARRRVV
101: AGRTDSDAAD GECEDVEERD PASRRSRFYT LIKACLMMSV FLLVVELAAY SNGRVNLAIF INSFNTSWIR FRATYVAPPL QLLADACVVL FLVQSADRLF
201: QSLGCFYILV KRIKPKPLSP ALADAEDPDA GYYPMVLVQI PMCNEKEVYR QSIAAVCNLD WPRSNFLVQV LDDSDDVATQ ALIKEEVEKW RHSGAHIVYR
301: HRVLREGYKA GNLKSAMSCS YVKDYEYVAI FDADFQPYPD FLKRTVPHFK DNEDLGLVQA RWSFVNKDEN LLTRLQNINL CFHFEVEQQV NGVFINFFGF
401: NGTAGVWRIK AVEDSGGWME RTTVEDMDIA VRAHLKGWKF VFLNDVECQC ELPESYEAYR KQQHRWHSGP MQLFRLCLPD IIRCKIVFWK KANLIFLFFL
501: LRKLILPFYS FTLFCIILPM TMFVPEAELP DWVVCYIPVL MSFLNIAPAP KSFPFIIPYL LFENTMSVTK FNAMISGLFQ LGSTYEWVVT KKSGRSLEGD
601: LISLAPKGLK QLKYGSVPAI NVAIKEQSKA KKESKKYNRI YKKELAMSLL LLSAAARSLL SKQGIHFYFL LFQGISFLLV GLDLIGQDIK

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.