Factsheet for Solyc04g077470.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 2
golgi 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012668	Potato	plasma membrane	97.98	97.98
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	78.17	84.3
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	78.03	82.83
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	62.4	81.66
KRH15467	Soybean	plasma membrane	74.8	79.4
KRH61452	Soybean	plasma membrane	75.61	79.24
KRH52142	Soybean	plasma membrane	75.34	79.18
Os01t0766900-01	Rice	golgi, plasma membrane	18.33	79.07
AT4G07960.1	Thale cress	plasma membrane	74.12	78.68
Bra000635.1-P	Field mustard	plasma membrane	73.32	78.61
CDX83148	Canola	plasma membrane	73.18	78.47
GSMUA_Achr7P00750_001	Banana	plasma membrane	65.9	78.37
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	65.36	77.97
GSMUA_Achr6P30200_001	Banana	cytosol	64.56	77.63
GSMUA_Achr5P01920_001	Banana	plasma membrane	67.12	77.33
GSMUA_Achr4P32270_001	Banana	plasma membrane	65.63	76.33
Os03t0770800-01	Rice	plasma membrane	59.3	73.83
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	69.68	73.44
Os05t0510800-01	Rice	plasma membrane	67.39	72.67
EER90820	Sorghum	plasma membrane	67.39	72.25
KXG22328	Sorghum	plasma membrane	67.66	72.02
KXG33450	Sorghum	mitochondrion, peroxisome, plasma membrane	66.71	71.84
Zm00001d012666_P003	Maize	plasma membrane	66.17	71.37
TraesCS5A01G405700.1	Wheat	mitochondrion	67.25	70.98
Zm00001d043336_P001	Maize	plasma membrane	65.23	70.86
Zm00001d034205_P001	Maize	plasma membrane	67.66	70.8
Zm00001d013168_P001	Maize	plasma membrane	65.36	70.7
Zm00001d038676_P001	Maize	plasma membrane	66.58	70.37
TraesCS5B01G410400.1	Wheat	mitochondrion	67.39	70.22
HORVU3Hr1G074570.1	Barley	plasma membrane	65.63	69.97
TraesCS3B01G337100.1	Wheat	plasma membrane	64.96	69.05
HORVU1Hr1G077230.2	Barley	plasma membrane	64.82	68.81
TraesCS3A01G299500.1	Wheat	plasma membrane	65.23	68.75
TraesCS1A01G331800.1	Wheat	plasma membrane	64.96	68.66
TraesCS1D01G334400.1	Wheat	plasma membrane	64.96	68.66
TraesCS3D01G302300.1	Wheat	plasma membrane	65.09	68.61
TraesCS1B01G345400.1	Wheat	plasma membrane	64.69	68.38
TraesCS5D01G415700.1	Wheat	mitochondrion	67.52	68.07
Solyc02g089640.2.1	Tomato	plasma membrane	59.97	68.04
TraesCS1D01G312700.1	Wheat	plasma membrane	62.94	67.68
HORVU1Hr1G067470.1	Barley	plasma membrane	62.53	67.54
Os07t0124750-00	Rice	plasma membrane	64.82	67.27
TraesCS1A01G312600.1	Wheat	mitochondrion, plasma membrane	62.53	67.25
TraesCS1B01G324200.1	Wheat	mitochondrion	62.4	67.1
Solyc08g006310.2.1	Tomato	golgi, peroxisome, plasma membrane	61.46	65.71
KXG34323	Sorghum	plasma membrane	60.24	65.54
Solyc09g057640.2.1	Tomato	cytosol, peroxisome, plasma membrane	58.76	63.56
Solyc11g007600.1.1	Tomato	plasma membrane	31.94	44.8
Solyc05g055410.1.1	Tomato	plasma membrane	31.4	44.3
Solyc09g009010.2.1	Tomato	cytosol, peroxisome, plasma membrane	17.66	43.81
Solyc10g083670.1.1	Tomato	plasma membrane	31.27	43.53
Solyc06g074630.2.1	Tomato	plasma membrane	31.13	43.34
Solyc11g066820.1.1	Tomato	plasma membrane	30.59	43.32

Protein Annotations

EnsemblPlants:Solyc04g077470.2.1	EnsemblPlantsGene:Solyc04g077470.2	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	ncoils:Coil	PANTHER:PTHR32044	PANTHER:PTHR32044:SF45	PFAM:PF13641
SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000276647A	UniProt:K4BUI4	MapMan:21.2.1.1.1

Description

No Description!

Coordinates

chr4:+:62384500..62387723

Molecular Weight (calculated)

85085.3 Da

IEP (calculated)

8.533

GRAVY (calculated)

-0.062

Length

742 amino acids

Sequence
(BLAST)

001: MAPSFTWWGK ETHRGTPVVV KMENPNNWSM VELEGPSEDD FLLPNDDVSS MSPYKREKVR NKNAKQLTWV LLLKAHKAAG CLTSIASALF SLASVVRRRV
101: AAGRTDSTDN SSTENPAVKN RFYTCIKIFL WLSVILLGFE ITAYFKGWYF SAPDLQLQYL YSLDFHKFAN PLAVQSVFDW FYSKWVLIRV EYLAPPLQFL
201: ANACIVLFLI QSVDRLVLCL GCFWVKMKKI KPIAKQGAMD LESGDGSGYY PMVLVQIPMC NEKEVYQQSI GAVCCLEWPK SRLLIQVLDD SDDPVTQTLI
301: NEEVRKWQKE GANIIYRHRV IREGYKAGNL KSAMNCSYVK DYEFVTIFDA DFQPMPDFLK RTVPYFKDND DIGLVQARWS FVNKDENLLT RLQHINLAFH
401: FEVEQQVNGI FLNFFGFNGT AGVWRIKALE ESGGWLERTT VEDMDIAVRA HLHGWKFIFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAIIK
501: SKISIWKKGN LIFLFFLLRK LVLPFYSFTL FCIILPMTMF IPEATLPSWV VSYVPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS
601: AYEWVVTKKS GRSSEGDLAS LAEEKPKHQR VASEEWTATK KSGRSSEGDL TLLVDGKPKH QRGVSVPDLE ELREEIKEKE KKASRKKKHN RIYTKELALA
701: FLLLTASLRS LLSAQGIHFY FLLFQGISFL LVGLDLIGEQ VD

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.