Factsheet for TraesCS5D01G415700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 5
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G410400.1	Wheat	mitochondrion	95.52	98.74
TraesCS5A01G405700.1	Wheat	mitochondrion	93.75	98.15
Os03t0770800-01	Rice	plasma membrane	72.69	89.77
EER90820	Sorghum	plasma membrane	83.42	88.73
Zm00001d013168_P001	Maize	plasma membrane	80.43	86.3
Zm00001d034205_P001	Maize	plasma membrane	82.47	85.61
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	67.8	80.23
GSMUA_Achr7P00750_001	Banana	plasma membrane	67.8	79.97
GSMUA_Achr4P32270_001	Banana	plasma membrane	68.75	79.31
GSMUA_Achr5P01920_001	Banana	plasma membrane	69.02	78.88
TraesCS1D01G312700.1	Wheat	plasma membrane	73.51	78.41
GSMUA_Achr6P30200_001	Banana	cytosol	64.95	77.47
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	59.65	77.42
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	71.74	75.0
TraesCS3D01G302300.1	Wheat	plasma membrane	70.65	73.86
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.97	73.68
Bra000635.1-P	Field mustard	plasma membrane	69.16	73.55
CDX83148	Canola	plasma membrane	69.02	73.41
KRH61452	Soybean	plasma membrane	70.24	73.02
KRH15467	Soybean	plasma membrane	69.29	72.96
TraesCS1D01G334400.1	Wheat	plasma membrane	69.16	72.51
KRH52142	Soybean	plasma membrane	69.43	72.38
AT4G07960.1	Thale cress	plasma membrane	67.93	71.53
PGSC0003DMT400030125	Potato	plasma membrane	63.59	70.27
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	65.35	69.91
Solyc04g077470.2.1	Tomato	plasma membrane	68.07	67.52
PGSC0003DMT400012668	Potato	plasma membrane	67.8	67.25
TraesCS3D01G010500.1	Wheat	cytosol, peroxisome, plasma membrane	59.78	58.05
TraesCS7D01G389500.1	Wheat	plasma membrane, plastid	31.52	44.36
TraesCS6D01G158600.1	Wheat	plasma membrane	31.11	44.21
TraesCS7D01G389400.1	Wheat	plasma membrane	30.03	43.16
TraesCS2D01G532800.1	Wheat	plasma membrane	28.8	40.3
TraesCS2D01G163000.2	Wheat	plasma membrane	31.79	40.28
TraesCS7D01G190000.1	Wheat	plasma membrane	29.76	40.18
TraesCS7D01G544700.1	Wheat	golgi	28.12	39.81
TraesCS6D01G094300.1	Wheat	plasma membrane, plastid	28.53	39.55
TraesCS7D01G389100.1	Wheat	plasma membrane	29.35	38.92
TraesCS3D01G485600.1	Wheat	plasma membrane	28.8	38.9
TraesCS3D01G504200.1	Wheat	plasma membrane	28.67	36.89
TraesCS3D01G027600.1	Wheat	plasma membrane	28.26	36.49
TraesCS3D01G015000.1	Wheat	plasma membrane	27.45	35.56

Protein Annotations

EnsemblPlants:TraesCS5D01G415700.1	EnsemblPlantsGene:TraesCS5D01G415700	Gene3D:3.90.550.10	InterPro:Glyco_trans_2-like	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans
PANTHER:PTHR32044	PANTHER:PTHR32044:SF47	PFAM:PF13632	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix
MapMan:21.2.1.1.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:478163072..478166660

Molecular Weight (calculated)

82549.5 Da

IEP (calculated)

9.011

GRAVY (calculated)

0.042

Length

736 amino acids

Sequence
(BLAST)

001: MAPWTGLWGA RAGAGAGAYR GTPVVVKMEN PNWSISEISP EDAEDEDFLV SGAGAARRRK GGRGKNAKQI TWVLLLKAHR AAGCLASLAS AAVTLGAAAR
101: RRVADGRTDA DAGATPGSAG ESPVLRSRFY AFIRAFLLLS LLLLAVELAA RFHGWDLAAS ALALPIIGVE SLYASWLRLR AAYLAPLLQF LTDACVVLFL
201: IQSADRLIQC LGSFYITVKR IKPRLKSPAL PDAEDPDAGY YPMVLVQIPM CNEKEVSVAR SQAAPLIPFP NSQPRNQPLF VVQVYQQSIA AVCNLDWPRS
301: NFLVQVLDDS DDPTTQSLIR EEVAKWQQTG ARILYRHRVL RDGYKAGNLK SAMACSYVKD YEFVAIFDAD FQPNPDFLKR TVPHFKDNDE LGLVQARWSF
401: VNKDENLLTR LQNINLCFHF EVEQQVNGVF LNFFGFNGTA GVWRIKALEE SGGWMERTTV EDMDIAVRAH LHGWKFIFLN DVECQCELPE SYEAYRKQQH
501: RWHSGPMQLF RLCIPDIIKS KISVWKKFNL IFLFFLLRKL ILPFYSFTLF CIILPMTMFV PEAELPDWVV CYIPALMSLL NILPSPKSFP FIIPYLLFEN
601: TMSVTKFNAM ISGLFQLGSA YEWVVTKKSG RSSEGDLISL AAAPPRELRH HPKTGSAPSM EALMVLKEQP SPKKEGKKQQ KKHNRIYKKE LALSLLLLTA
701: AARSLLTKQG IHFYFLLFQG ISFLLVGLDL IGEQVE

Best Arabidopsis Sequence Match ( AT2G24630.1 )
(BLAST)

001: MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS

Arabidopsis Description

CSLC8Probable xyloglucan glycosyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA2]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.