Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- golgi 1
- plasma membrane 3
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34018 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 74.96 | 92.42 |
| Bra000635.1-P | Field mustard | plasma membrane | 90.56 | 91.47 |
| CDX83148 | Canola | plasma membrane | 90.41 | 91.33 |
| Os01t0766900-01 | Rice | golgi, plasma membrane | 20.46 | 83.14 |
| VIT_18s0001g08580.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 79.54 | 79.54 |
| GSMUA_Achr7P00750_001 | Banana | plasma membrane | 70.53 | 79.01 |
| PGSC0003DMT400030125 | Potato | plasma membrane | 75.25 | 78.98 |
| KRH15467 | Soybean | plasma membrane | 78.83 | 78.83 |
| GSMUA_Achr6P30200_001 | Banana | cytosol | 69.24 | 78.44 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plasma membrane | 69.53 | 78.14 |
| Solyc12g088240.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 76.68 | 77.91 |
| KRH61452 | Soybean | plasma membrane | 78.68 | 77.68 |
| KRH52142 | Soybean | plasma membrane | 78.11 | 77.34 |
| GSMUA_Achr5P01920_001 | Banana | plasma membrane | 71.1 | 77.17 |
| GSMUA_Achr4P32270_001 | Banana | plasma membrane | 69.67 | 76.33 |
| PGSC0003DMT400012668 | Potato | plasma membrane | 79.11 | 74.53 |
| Solyc04g077470.2.1 | Tomato | plasma membrane | 78.68 | 74.12 |
| Os03t0770800-01 | Rice | plasma membrane | 62.66 | 73.49 |
| GSMUA_Achr4P23120_001 | Banana | cytosol, peroxisome, plasma membrane | 73.96 | 73.44 |
| Os05t0510800-01 | Rice | plasma membrane | 71.82 | 72.97 |
| EER90820 | Sorghum | plasma membrane | 71.82 | 72.54 |
| KXG33450 | Sorghum | mitochondrion, peroxisome, plasma membrane | 70.53 | 71.55 |
| KXG22328 | Sorghum | plasma membrane | 71.24 | 71.45 |
| Zm00001d012666_P003 | Maize | plasma membrane | 70.24 | 71.37 |
| Zm00001d013168_P001 | Maize | plasma membrane | 69.81 | 71.14 |
| Zm00001d034205_P001 | Maize | plasma membrane | 71.96 | 70.94 |
| TraesCS5A01G405700.1 | Wheat | mitochondrion | 71.24 | 70.84 |
| Zm00001d043336_P001 | Maize | plasma membrane | 68.67 | 70.28 |
| TraesCS5B01G410400.1 | Wheat | mitochondrion | 71.24 | 69.94 |
| Zm00001d038676_P001 | Maize | plasma membrane | 69.96 | 69.66 |
| HORVU3Hr1G074570.1 | Barley | plasma membrane | 68.96 | 69.25 |
| HORVU1Hr1G077230.2 | Barley | plasma membrane | 68.81 | 68.81 |
| TraesCS1A01G331800.1 | Wheat | plasma membrane | 69.1 | 68.8 |
| TraesCS1B01G345400.1 | Wheat | plasma membrane | 68.96 | 68.66 |
| TraesCS1D01G334400.1 | Wheat | plasma membrane | 68.96 | 68.66 |
| TraesCS3B01G337100.1 | Wheat | plasma membrane | 68.38 | 68.48 |
| TraesCS3A01G299500.1 | Wheat | plasma membrane | 68.96 | 68.47 |
| HORVU1Hr1G067470.1 | Barley | plasma membrane | 67.1 | 68.27 |
| TraesCS1D01G312700.1 | Wheat | plasma membrane | 67.24 | 68.12 |
| Os07t0124750-00 | Rice | plasma membrane | 69.67 | 68.11 |
| TraesCS1A01G312600.1 | Wheat | mitochondrion, plasma membrane | 67.1 | 67.97 |
| TraesCS1B01G324200.1 | Wheat | mitochondrion | 67.1 | 67.97 |
| TraesCS5D01G415700.1 | Wheat | mitochondrion | 71.53 | 67.93 |
| TraesCS3D01G302300.1 | Wheat | plasma membrane | 68.38 | 67.9 |
| AT4G31590.1 | Thale cress | plasma membrane | 66.38 | 67.05 |
| KXG34323 | Sorghum | plasma membrane | 64.81 | 66.42 |
| AT2G24630.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 64.95 | 65.8 |
| AT3G28180.1 | Thale cress | plasma membrane | 62.37 | 64.78 |
| AT3G07330.1 | Thale cress | cytosol, peroxisome, plasma membrane | 59.8 | 61.29 |
| AT5G03760.1 | Thale cress | plasma membrane | 32.33 | 42.4 |
| AT5G22740.1 | Thale cress | plasma membrane | 31.76 | 41.57 |
| AT1G23480.2 | Thale cress | plasma membrane | 32.62 | 41.01 |
| AT4G13410.1 | Thale cress | extracellular, plasma membrane | 31.19 | 40.6 |
| AT2G35650.1 | Thale cress | plasma membrane | 31.9 | 40.11 |
| AT5G16190.4 | Thale cress | plasma membrane | 30.76 | 40.04 |
| AT3G56000.1 | Thale cress | endoplasmic reticulum | 30.62 | 40.0 |
| AT4G16590.1 | Thale cress | endoplasmic reticulum, plasma membrane | 29.33 | 39.42 |
| AT1G24070.1 | Thale cress | plasma membrane | 31.04 | 39.31 |
Protein Annotations
| MapMan:21.2.1.1.1 | Gene3D:3.90.550.10 | EntrezGene:826301 | UniProt:A0A178UW53 | ProteinID:AAD15482.1 | ProteinID:AEE82586.1 |
| EMBL:AK118480 | ProteinID:ANM66907.1 | ArrayExpress:AT4G07960 | EnsemblPlantsGene:AT4G07960 | RefSeq:AT4G07960 | TAIR:AT4G07960 |
| RefSeq:AT4G07960-TAIR-G | EnsemblPlants:AT4G07960.1 | TAIR:AT4G07960.1 | Symbol:ATCSLC12 | EMBL:AY087066 | Unigene:At.33785 |
| EMBL:BT008770 | ProteinID:CAB77947.1 | ncoils:Coil | GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0008150 |
| GO:GO:0009506 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016740 |
| GO:GO:0016757 | GO:GO:0071555 | InterPro:Glyco_trans_2-like | InterPro:IPR029044 | EMBL:KJ138765 | RefSeq:NP_001328773.1 |
| RefSeq:NP_192536.1 | InterPro:Nucleotide-diphossugar_trans | ProteinID:OAO97845.1 | PFAM:PF13632 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000256 | PO:PO:0000262 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF45 | UniProt:Q9ZQB9 |
| SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI000004890E | UniProt:W8Q306 | SEG:seg | : |
Description
CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
Coordinates
chr4:-:4802253..4805647
Molecular Weight (calculated)
80126.9 Da
IEP (calculated)
9.576
GRAVY (calculated)
-0.026
Length
699 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.