Factsheet for AT4G16590.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90506	Canola	plasma membrane	89.81	84.45
Bra012702.1-P	Field mustard	plasma membrane	81.92	84.36
CDY09672	Canola	golgi	52.88	78.12
AT4G13410.1	Thale cress	extracellular, plasma membrane	68.27	66.11
AT1G24070.1	Thale cress	plasma membrane	68.85	64.86
AT5G16190.4	Thale cress	plasma membrane	65.77	63.69
AT1G23480.2	Thale cress	plasma membrane	60.38	56.47
AT5G03760.1	Thale cress	plasma membrane	54.42	53.1
AT2G35650.1	Thale cress	plasma membrane	55.38	51.8
AT3G56000.1	Thale cress	endoplasmic reticulum	52.31	50.84
AT5G22740.1	Thale cress	plasma membrane	51.73	50.37
AT3G28180.1	Thale cress	plasma membrane	38.46	29.72
AT4G07960.1	Thale cress	plasma membrane	39.42	29.33
AT2G24630.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	37.69	28.41
AT4G31590.1	Thale cress	plasma membrane	37.69	28.32
AT3G07330.1	Thale cress	cytosol, peroxisome, plasma membrane	36.92	28.15

Protein Annotations

MapMan:21.2.3.1.1.1	Gene3D:3.90.550.10	ArrayExpress:AT4G16590	EnsemblPlantsGene:AT4G16590	RefSeq:AT4G16590	TAIR:AT4G16590
RefSeq:AT4G16590-TAIR-G	EnsemblPlants:AT4G16590.1	TAIR:AT4G16590.1	Symbol:ATCSLA01	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016740
GO:GO:0016757	GO:GO:0071555	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PFAM:PF13641	PO:PO:0000005
PO:PO:0000293	PO:PO:0001081	PO:PO:0001185	PO:PO:0007095	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009052	PO:PO:0020030	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR32044
PANTHER:PTHR32044:SF21	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0008494765	SEG:seg	:

Description

ATCSLA01cellulose synthase-like A01 [Source:TAIR;Acc:AT4G16590]

Coordinates

chr4:+:9345150..9349258

Molecular Weight (calculated)

60552.2 Da

IEP (calculated)

9.498

GRAVY (calculated)

0.147

Length

520 amino acids

Sequence
(BLAST)

001: MSLFLKPFLF LYDTTLSLLL LLFNGWSLED TAAAQKRREA DKNAAETEWI QLQYLWTKTR SVVLLPVFKG LVVMCLVLSI IVFFESFYMN FVILFVKLFK
101: RKPHKVYKWE AMQEDVEVGP DNYPMVLIQI PMYNEKEEGV DVEIAKWQSQ GINIRCERRD NRNGYKAGAM KEALTQSYVK QCDFVAVFDA DFQPEPDYLI
201: RAVPFLVHNP DVALVQARWI FVNANKCLMT RMQEMSLNYH FKVEQESGST RHAFFGFNGT AGVWRISAME AAGGWKSRTT VEDMDLAVRV GLHGWKFVYL
301: NDLTVRNELP SKFKAYRFQQ HRWSCGPANL FRKMTMEIIF NKRVSIWKKF YVIYSFFFVR KVAVHFLTFF FYCIIVPTSV FFPEIHIPSW STIYVPSLIS
401: IFHTLATPRS FYLVIFWVLF ENVMAMHRTK GTCIGLLEGG RVNEWVVTEK LGDALKSKLL SRVVQRKSCY QRVNSKEVMV GVYILGCALY GLIYGHTWLH
501: FYLFLQATAF FVSGFGFVGT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.