Factsheet for AT4G13410.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

endoplasmic reticulum 4
golgi 4
extracellular 5
plastid 1
vacuole 3
plasma membrane 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47369	Canola	plasma membrane	49.72	89.0
CDY01129	Canola	plasma membrane	83.99	83.83
AT5G16190.4	Thale cress	plasma membrane	75.79	75.79
AT1G24070.1	Thale cress	plasma membrane	77.47	75.36
CDY47368	Canola	endoplasmic reticulum, extracellular	8.01	74.14
AT4G16590.1	Thale cress	endoplasmic reticulum, plasma membrane	66.11	68.27
Bra032705.1-P	Field mustard	plasma membrane	84.36	63.62
AT1G23480.2	Thale cress	plasma membrane	64.06	61.87
AT5G03760.1	Thale cress	plasma membrane	59.03	59.47
AT5G22740.1	Thale cress	plasma membrane	57.54	57.87
AT2G35650.1	Thale cress	plasma membrane	58.85	56.83
AT3G56000.1	Thale cress	endoplasmic reticulum	56.05	56.26
Os02t0744650-00	Rice	cytosol, mitochondrion, peroxisome, plasma membrane	40.97	54.86
AT3G28180.1	Thale cress	plasma membrane	41.15	32.84
AT4G31590.1	Thale cress	plasma membrane	41.15	31.94
AT2G24630.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	40.97	31.88
AT4G07960.1	Thale cress	plasma membrane	40.6	31.19
AT3G07330.1	Thale cress	cytosol, peroxisome, plasma membrane	39.29	30.94
TraesCS2B01G370500.1	Wheat	cytosol	7.26	27.66
Os02t0744600-01	Rice	endoplasmic reticulum, extracellular	0.93	20.83

Protein Annotations

MapMan:21.2.3.1.1.1	Gene3D:3.90.550.10	EntrezGene:826972	ProteinID:AEE83276.1	ProteinID:ANM67909.1	ArrayExpress:AT4G13410
EnsemblPlantsGene:AT4G13410	RefSeq:AT4G13410	TAIR:AT4G13410	RefSeq:AT4G13410-TAIR-G	EnsemblPlants:AT4G13410.1	TAIR:AT4G13410.1
Symbol:ATCSLA15	ProteinID:CAB40776.1	ProteinID:CAB78383.1	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016740
GO:GO:0016757	GO:GO:0047259	GO:GO:0071555	GO:GO:0097502	InterPro:IPR029044	EMBL:KJ138761
RefSeq:NP_001329704.1	RefSeq:NP_193077.2	InterPro:Nucleotide-diphossugar_trans	PFAM:PF13641	PO:PO:0000037	PO:PO:0000293
PO:PO:0001078	PO:PO:0001081	PO:PO:0004507	PO:PO:0007064	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020137	PO:PO:0025022	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21
UniProt:Q9T0L2	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000034F1F7	UniProt:W8PV68	SEG:seg

Description

CSLA15Probable mannan synthase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0L2]

Coordinates

chr4:-:7792016..7796041

Molecular Weight (calculated)

62378.0 Da

IEP (calculated)

8.673

GRAVY (calculated)

0.188

Length

537 amino acids

Sequence
(BLAST)

001: MFLLLKPLLS LHDLSLNLLS VMFHGETLKA SVDGVGINMS TMWRETRNVF IVPLFKCIVV MCLIISLLVF VESVYMNLVV LYVKLFNRKP EKVYKWEAMQ
101: EDMELGHQNY PMVLVQIPMY NEREVFELSI GAACRLTWPS DRLIVQVLDD STDPAIMELV SMECTKWASK DININYERRE NRNGYKAGAL KHGMRHSYVK
201: QCQYLAIFDA DFQPEPDYLQ RAIPFLIHNP EVALVQARWR FVNANTCLMT RMQEMSLNYH FMAEQQSGST RHAFFGFNGT AGVWRMVAME EAGGWKDRTT
301: VEDMDLAVRV GLLGWKFIFV NDLEVKSELP SQFKAFRFQQ HRWSCGPANL IRKMTMEIIH NKRVKIWKKF YVIYSFFFLR KIVVHFFTYF FYCVILPTSV
401: FLPEVNIPNW STIYVPSVIT LLSAIATPRS FYLVIFWVLF ENVMAMHRTK GTLIGLFEGG RVNEWVVTEK LGDTLNTKLL PQNGRLPKRV NLKEMMMGIY
501: ILCCACYDFA FGNAFLYLYL FMQATAFLIS GVGFVGT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.