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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 1
  • endoplasmic reticulum 3
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, endoplasmic reticulum, plasma membrane
BaCelLo:cytosol
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY54604 Canola plasma membrane 85.79 87.6
Bra007207.1-P Field mustard plasma membrane 85.61 87.57
CDX72181 Canola plasma membrane 85.61 87.57
AT1G23480.2 Thale cress plasma membrane 65.61 63.13
AT5G03760.1 Thale cress plasma membrane 58.5 58.72
AT5G16190.4 Thale cress plasma membrane 56.45 56.24
AT4G13410.1 Thale cress extracellular, plasma membrane 56.26 56.05
AT1G24070.1 Thale cress plasma membrane 57.01 55.25
AT5G22740.1 Thale cress plasma membrane 54.58 54.68
AT2G35650.1 Thale cress plasma membrane 56.82 54.68
AT4G16590.1 Thale cress endoplasmic reticulum, plasma membrane 50.84 52.31
AT3G07330.1 Thale cress cytosol, peroxisome, plasma membrane 40.56 31.82
AT3G28180.1 Thale cress plasma membrane 39.63 31.5
AT2G24630.1 Thale cress endoplasmic reticulum, peroxisome, plasma membrane 39.81 30.87
AT4G31590.1 Thale cress plasma membrane 39.81 30.78
AT4G07960.1 Thale cress plasma membrane 40.0 30.62
Protein Annotations
MapMan:21.2.3.1.1.1Gene3D:3.90.550.10EntrezGene:824766ProteinID:AEE79465.1EMBL:AK227328ArrayExpress:AT3G56000
EnsemblPlantsGene:AT3G56000RefSeq:AT3G56000TAIR:AT3G56000RefSeq:AT3G56000-TAIR-GEnsemblPlants:AT3G56000.1TAIR:AT3G56000.1
Symbol:ATCSLA14Unigene:At.34971EMBL:BT004569ProteinID:CAB87854.1GO:GO:0000139GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016043
GO:GO:0016740GO:GO:0016757GO:GO:0047259GO:GO:0071555GO:GO:0097502InterPro:IPR029044
EMBL:KJ138786RefSeq:NP_191159.2InterPro:Nucleotide-diphossugar_transPFAM:PF13641PO:PO:0000256PO:PO:0000262
PO:PO:0000293PO:PO:0001054PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0008019PO:PO:0009005PO:PO:0009025PO:PO:0009047PO:PO:0020030
PO:PO:0020038PO:PO:0020137PO:PO:0025022PANTHER:PTHR32044PANTHER:PTHR32044:SF21UniProt:Q84W06
SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0000197022UniProt:W8PV95SEG:seg:
Description
CSLA14Probable mannan synthase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q84W06]
Coordinates
chr3:-:20783269..20785885
Molecular Weight (calculated)
61486.3 Da
IEP (calculated)
6.708
GRAVY (calculated)
0.216
Length
535 amino acids
Sequence
(BLAST)
001: MATLSDGLFD DMSVLGVIGY VLEQTRFIFL VPILKRLVNL CQVVSVLLFV DAAYMAIVVA IVKLLGRTPQ KVLKWESFKS DDIELAPSSN HPMVLIQIPI
101: FNEKEVCQLS IGAACKLSWP LDRMIIQVLD DSTEEESQKL VRLECKKWES EGITIKSEVR GGFREGFKAG ALTAGMKHSY VDEYKCEFVV IFDADFQPEP
201: DFLERTVPFL VHNPEIALVQ AGWKYGNADE CCMTRIQEMS LNYHFAVEQK SGSSILGFFG FNGTAGVWRI KALNEAEGWK DRTIVEDMDL AVRAYLRGSK
301: FVYVDDVKVK NELPSSFQAY RFQQHRWSCG PANLFKKIAM EIIKNQNVSL WKKVYLIYNF FFLRKIVVHI FTFVFYCVIL PATVIFPEIE VPKWTTIYIP
401: ATITILNAIA TPKSFYLILY WILFENVMAM HRSIGTLIGL LETSRVKEWI VTQKLGESNN LRENLIFPDH YSFPERLRWR EIMVGMYLFI CGYYDFVFGR
501: TYLYVYLFLQ SIAFFVVGVG YVGMPVPSTP VQTSE
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.