Factsheet for AT1G23480.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

endoplasmic reticulum 4
golgi 4
extracellular 5
mitochondrion 1
vacuole 3
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024603.1-P	Field mustard	plasma membrane	93.17	93.33
CDY44151	Canola	plasma membrane	92.99	93.15
CDY04707	Canola	plasma membrane	92.63	92.79
AT3G56000.1	Thale cress	endoplasmic reticulum	63.13	65.61
AT5G03760.1	Thale cress	plasma membrane	61.69	64.35
AT5G16190.4	Thale cress	plasma membrane	62.05	64.25
AT4G13410.1	Thale cress	extracellular, plasma membrane	61.87	64.06
AT1G24070.1	Thale cress	plasma membrane	61.33	61.78
AT5G22740.1	Thale cress	plasma membrane	58.81	61.24
AT4G16590.1	Thale cress	endoplasmic reticulum, plasma membrane	56.47	60.38
AT2G35650.1	Thale cress	plasma membrane	59.53	59.53
AT3G07330.1	Thale cress	cytosol, peroxisome, plasma membrane	41.37	33.72
AT3G28180.1	Thale cress	plasma membrane	40.47	33.43
AT4G07960.1	Thale cress	plasma membrane	41.01	32.62
AT4G31590.1	Thale cress	plasma membrane	39.93	32.08
AT2G24630.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	39.21	31.59

Protein Annotations

MapMan:21.2.3.1.1.1	Gene3D:3.90.550.10	EntrezGene:838956	ProteinID:AAC98005.1	ProteinID:AAF79586.1	ProteinID:AEE30391.1
ProteinID:AEE30392.1	ProteinID:AEE30393.1	ArrayExpress:AT1G23480	EnsemblPlantsGene:AT1G23480	RefSeq:AT1G23480	TAIR:AT1G23480
RefSeq:AT1G23480-TAIR-G	EnsemblPlants:AT1G23480.2	TAIR:AT1G23480.2	Symbol:ATCSLA03	EMBL:AY099769	Unigene:At.41547
EMBL:BT000203	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016740	GO:GO:0016757	GO:GO:0047259
GO:GO:0071555	GO:GO:0097502	InterPro:IPR029044	EMBL:KJ138989	RefSeq:NP_001031084.1	RefSeq:NP_173762.4
RefSeq:NP_850952.1	InterPro:Nucleotide-diphossugar_trans	PFAM:PF13641	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001185	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009025	PO:PO:0009029	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21	UniProt:Q9LQC9
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI00000AC43A	UniProt:W8Q7B4	SEG:seg	:

Description

CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]

Coordinates

chr1:+:8333472..8336414

Molecular Weight (calculated)

64405.1 Da

IEP (calculated)

8.496

GRAVY (calculated)

0.221

Length

556 amino acids

Sequence
(BLAST)

001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.